RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
VPS25-206ENST00000591584 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 BTBD6Q96KE9 485 aa11□□□□□ -0.65
VPS25-206ENST00000591584 ZNF560Q96MR9 790 aa11□□□□□ -0.65
VPS25-206ENST00000591584 FRMD8P1Q9BZ68 369 aaPredicted RBP11□□□□□ -0.65
VPS25-206ENST00000591584 UPF3AQ9H1J1 476 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 SNTG2Q9NY99 539 aa11□□□□□ -0.65
VPS25-206ENST00000591584 MTRF1LQ9UGC7 380 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 POLIQ9UNA4 740 aa11□□□□□ -0.65
VPS25-206ENST00000591584 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
VPS25-206ENST00000591584 TRPM7Q96QT4 1865 aa11□□□□□ -0.65
VPS25-206ENST00000591584 TTI1O43156 1089 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CSDE1O75534 798 aaKnown RBP10.99□□□□□ -0.65
VPS25-206ENST00000591584 ECEL1O95672 775 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 SYF2O95926 243 aaKnown RBP10.99□□□□□ -0.65
VPS25-206ENST00000591584 KRT7P08729 469 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 RARAP10276 462 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 KRT3P12035 628 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 PAX3P23760 479 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 PTGIRP43119 386 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CAV1Q03135 178 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CCL14Q16627 93 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 ZNF394Q53GI3 561 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 ODF2Q5BJF6 829 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 SESTD1Q86VW0 696 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 ZDHHC17Q8IUH5 632 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CCDC105Q8IYK2 499 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 STK32AQ8WU08 396 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 TFAP2BQ92481 460 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 HEXIM2Q96MH2 286 aaKnown RBP10.99□□□□□ -0.65
VPS25-206ENST00000591584 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 OSMRQ99650 979 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 SH3GL2Q99962 352 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CELF4Q9BZC1 486 aaKnown RBP10.99□□□□□ -0.65
VPS25-206ENST00000591584 SYNCQ9H7C4 482 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
VPS25-206ENST00000591584 CHORDC1Q9UHD1 332 aaPredicted RBP10.99□□□□□ -0.65
VPS25-206ENST00000591584 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS25-206ENST00000591584 MEFVO15553 781 aaPredicted RBP10.98□□□□□ -0.65
VPS25-206ENST00000591584 SEPT4O43236 478 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 TREHO43280 583 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 DAPK3O43293 454 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 ECM2O94769 699 aaPredicted RBP10.98□□□□□ -0.65
VPS25-206ENST00000591584 MICAL2O94851 1124 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 TJP3O95049 919 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 GAS8O95995 478 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 CFHP08603 1231 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 RARBP10826 455 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 CYBAP13498 195 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 ITIH2P19823 946 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 HOXD10P28358 340 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 GGCXP38435 758 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 GPD2P43304 727 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 EIF3BP55884 814 aaKnown RBP10.98□□□□□ -0.65
VPS25-206ENST00000591584 SLMAPQ14BN4 828 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 SIX1Q15475 284 aaPredicted RBP10.98□□□□□ -0.65
VPS25-206ENST00000591584 ARHGAP17Q68EM7 881 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 DENND1BQ6P3S1 775 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 DRICH1Q6PGQ1 229 aaPredicted RBP10.98□□□□□ -0.65
VPS25-206ENST00000591584 SCARA5Q6ZMJ2 495 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 RUFY4Q6ZNE9 571 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 FAM43BQ6ZT52 329 aaPredicted RBP10.98□□□□□ -0.65
VPS25-206ENST00000591584 SMC1BQ8NDV3 1235 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 MCRS1Q96EZ8 462 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 SDCBP2Q9H190 292 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 SLC38A7Q9NVC3 462 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 ASNSD1Q9NWL6 643 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 GDAP2Q9NXN4 497 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 WHRNQ9P202 907 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 GINS2Q9Y248 185 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
VPS25-206ENST00000591584 ESYT3A0FGR9 886 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 GOLGA6L10A6NI86 522 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 H3BQF6 201 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 AGPSO00116 658 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 O00370 1275 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 PIRO00625 290 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 POLR3GO15318 223 aaPredicted RBP10.97□□□□□ -0.65
VPS25-206ENST00000591584 CABYRO75952 493 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 CALCAP01258 141 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 C6orf222P0C671 652 aaPredicted RBP10.97□□□□□ -0.65
VPS25-206ENST00000591584 ECHS1P30084 290 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 SCNN1AP37088 669 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 PSMC4P43686 418 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 MARCKSL1P49006 195 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 NDST1P52848 882 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 CDH8P55286 799 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 PSMC1P62191 440 aaKnown RBP10.97□□□□□ -0.65
VPS25-206ENST00000591584 MRPS25P82663 173 aaKnown RBP10.97□□□□□ -0.65
VPS25-206ENST00000591584 MRPS6P82932 125 aaKnown RBP10.97□□□□□ -0.65
VPS25-206ENST00000591584 CALCOCO2Q13137 446 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 NOGQ13253 232 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 C9orf57Q5W0N0 161 aa10.97□□□□□ -0.65
VPS25-206ENST00000591584 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms