RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 CCDC149Q6ZUS6 474 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 GET4Q7L5D6 327 aaPredicted RBP12.36□□□□□ -0.43
VMP1-211ENST00000591315 THEM5Q8N1Q8 247 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 TOP6BLQ8N6T0 577 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 TAS1R2Q8TE23 839 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 SEMA4DQ92854 862 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 DHTKD1Q96HY7 919 aaPredicted RBP12.36□□□□□ -0.43
VMP1-211ENST00000591315 GBP4Q96PP9 640 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 PKMYT1Q99640 499 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 TSG101Q99816 390 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 DNAJC25Q9H1X3 360 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
VMP1-211ENST00000591315 LIMD1Q9UGP4 676 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 DPP7Q9UHL4 492 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
VMP1-211ENST00000591315 YIPF1Q9Y548 306 aa12.36□□□□□ -0.43
VMP1-211ENST00000591315 MAPK13O15264 365 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 EPB41P11171 864 aaKnown RBP12.35□□□□□ -0.43
VMP1-211ENST00000591315 KRT13P13646 458 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 HOXA9P31269 272 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 CCR2P41597 374 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 FKBP3Q00688 224 aaKnown RBP12.35□□□□□ -0.43
VMP1-211ENST00000591315 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 SDHAF4Q5VUM1 108 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 INTS8Q75QN2 995 aaKnown RBP12.35□□□□□ -0.43
VMP1-211ENST00000591315 GPR152Q8TDT2 470 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 ING5Q8WYH8 240 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 CORO1BQ9BR76 489 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
VMP1-211ENST00000591315 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
VMP1-211ENST00000591315 IKBKBO14920 756 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 XYLBO75191 536 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 CLSTN1O94985 981 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 LRG1P02750 347 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 RHOP08100 348 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 GJA1P17302 382 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 ATF6P18850 670 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 WARSP23381 471 aaKnown RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 FSHRP23945 695 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 GBP2P32456 591 aaPredicted RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 AP3M2P53677 418 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 TNNC1P63316 161 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 ORC1Q13415 861 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 STIM1Q13586 685 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 CBWD6Q4V339 395 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 DCAF17Q5H9S7 520 aaPredicted RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 CBWD3Q5JTY5 395 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 CBWD5Q5RIA9 395 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 TMEM86AQ8N2M4 240 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 TDRD5Q8NAT2 981 aaKnown RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 GIPC2Q8TF65 315 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 RSAD2Q8WXG1 361 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 SYT15Q9BQS2 421 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 ZNF334Q9HCZ1 680 aaPredicted RBP12.34□□□□□ -0.43
VMP1-211ENST00000591315 HMGXB4Q9UGU5 601 aa12.34□□□□□ -0.43
VMP1-211ENST00000591315 ZDBF2Q9HCK1 2354 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 FAM86C2PA6NEL3 165 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 MOSPD3O75425 235 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 HAPLN1P10915 354 aaPredicted RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 CEBPBP17676 345 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 CYP2F1P24903 491 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 ATICP31939 592 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 GNL1P36915 607 aaPredicted RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 LHX1P48742 406 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 MYL7Q01449 175 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 TSPY1Q01534 308 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 PAK1Q13153 545 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 PABPC1LQ4VXU2 614 aaKnown RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 ZNF667Q5HYK9 610 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 TCERG1LQ5VWI1 586 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 OR6B3Q8NGW1 331 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 RPP25Q9BUL9 199 aaKnown RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 SRRTQ9BXP5 876 aaKnown RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 LRRC3Q9BY71 257 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 OXCT2Q9BYC2 517 aaPredicted RBP12.33□□□□□ -0.44
VMP1-211ENST00000591315 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 TMEM8AQ9HCN3 771 aa12.33□□□□□ -0.44
VMP1-211ENST00000591315 NR2E1Q9Y466 385 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms