RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 PPM1HQ9ULR3 514 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 GLRA2P23416 452 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 CCNFP41002 786 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 DSG1Q02413 1049 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 KRT39Q6A163 491 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 C15orf52Q6ZUT6 534 aaKnown RBP16.59■□□□□ 0.25
MBD1-222ENST00000590208 BANPQ8N9N5 519 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 RBM15BQ8NDT2 890 aaKnown RBP16.59■□□□□ 0.25
MBD1-222ENST00000590208 CFAP61Q8NHU2 1237 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 ACCSQ96QU6 501 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 PANX3Q96QZ0 392 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 ECSITQ9BQ95 431 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 TMEM121Q9BTD3 319 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 TUBB6Q9BUF5 446 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 MYPNQ86TC9 1320 aa16.59■□□□□ 0.25
MBD1-222ENST00000590208 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 RIMBP2O15034 1052 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 SLC16A4O15374 487 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 DNAJC6O75061 913 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
MBD1-222ENST00000590208 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.24
MBD1-222ENST00000590208 CFAP157Q5JU67 520 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 RNASEH2BQ5TBB1 312 aaKnown RBP16.58■□□□□ 0.24
MBD1-222ENST00000590208 CENPUQ71F23 418 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 FAM111AQ96PZ2 611 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 VPS11Q9H270 941 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 MMADHCQ9H3L0 296 aaPredicted RBP16.58■□□□□ 0.24
MBD1-222ENST00000590208 GPRC5CQ9NQ84 441 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 LARSQ9P2J5 1176 aaKnown RBP16.58■□□□□ 0.24
MBD1-222ENST00000590208 MTO1Q9Y2Z2 717 aaKnown RBP16.58■□□□□ 0.24
MBD1-222ENST00000590208 UTRNP46939 3433 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 KDSRQ06136 332 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 CDC16Q13042 620 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 MFSD7Q6UXD7 560 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 C3orf62Q6ZUJ4 267 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 HAUS6Q7Z4H7 955 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 CERS5Q8N5B7 392 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 MZB1Q8WU39 189 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 THTPAQ9BU02 230 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 EBF3Q9H4W6 596 aa16.58■□□□□ 0.24
MBD1-222ENST00000590208 A6NJR5 290 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 DSG3P32926 999 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 PLCB3Q01970 1234 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 KRT72Q14CN4 511 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 FAM182AQ5T1J6 154 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 ANKRD22Q5VYY1 191 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 KATNAL2Q8IYT4 538 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 ALLCQ8N6M5 410 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 WDR83Q9BRX9 315 aaKnown RBP16.57■□□□□ 0.24
MBD1-222ENST00000590208 AVENQ9NQS1 362 aaPredicted RBP16.57■□□□□ 0.24
MBD1-222ENST00000590208 RAB20Q9NX57 234 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 ANGPTL2Q9UKU9 493 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 CREB3O43889 395 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 NDUFB10O96000 172 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 NSFP46459 744 aaKnown RBP16.57■□□□□ 0.24
MBD1-222ENST00000590208 PABPC1LQ4VXU2 614 aaKnown RBP16.57■□□□□ 0.24
MBD1-222ENST00000590208 FNBP1LQ5T0N5 605 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 CEP128Q6ZU80 1094 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 ZNF577Q9BSK1 485 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 PHACTR1Q9C0D0 580 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 SAE1Q9UBE0 346 aaPredicted RBP16.57■□□□□ 0.24
MBD1-222ENST00000590208 ZBTB21Q9ULJ3 1066 aa16.57■□□□□ 0.24
MBD1-222ENST00000590208 A8MXQ7 604 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 PSTPIP1O43586 416 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 GDF11O95390 407 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 CDK7P50613 346 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 MTMR2Q13614 643 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 MORF4L2Q15014 288 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 HIF1AQ16665 826 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 HSF5Q4G112 596 aaPredicted RBP16.56■□□□□ 0.24
MBD1-222ENST00000590208 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 RAPH1Q70E73 1250 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 FBXL13Q8NEE6 735 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 EXD1Q8NHP7 514 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 PYROXD1Q8WU10 500 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 NCSTNQ92542 709 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 KIFC3Q9BVG8 833 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 RANBP17Q9H2T7 1088 aaKnown RBP16.56■□□□□ 0.24
MBD1-222ENST00000590208 ZNF395Q9H8N7 513 aaPredicted RBP16.56■□□□□ 0.24
MBD1-222ENST00000590208 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 LPXNO60711 386 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 SCNN1BP51168 640 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 GPC3P51654 580 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 RAP1GDS1P52306 607 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 PRKD1Q15139 912 aaPredicted RBP16.56■□□□□ 0.24
MBD1-222ENST00000590208 ADGRD1Q6QNK2 874 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 SCUBE1Q8IWY4 988 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 KCTD17Q8N5Z5 321 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.56■□□□□ 0.24
MBD1-222ENST00000590208 CCDC110Q8TBZ0 833 aa16.56■□□□□ 0.24
MBD1-222ENST00000590208 VCX3BQ9H321 246 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms