RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 PPARAQ07869 468 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 ZNF543Q08ER8 600 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 PTPN14Q15678 1187 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 CDC37Q16543 378 aaPredicted RBP8.83□□□□□ -1
SMAD4-209ENST00000589941 LETM2Q2VYF4 491 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 TAF2Q6P1X5 1199 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 CEP85Q6P2H3 762 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 ZNF655Q8N720 491 aaPredicted RBP8.83□□□□□ -1
SMAD4-209ENST00000589941 ZCCHC14Q8WYQ9 949 aaKnown RBP8.83□□□□□ -1
SMAD4-209ENST00000589941 BRF1Q92994 677 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 TMEM47Q9BQJ4 181 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 MLXIPQ9HAP2 919 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 PRMT8Q9NR22 394 aaPredicted RBP8.83□□□□□ -1
SMAD4-209ENST00000589941 HECTD1Q9ULT8 2610 aa8.83□□□□□ -1
SMAD4-209ENST00000589941 NOTCH4Q99466 2003 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 MBLAC1A4D2B0 266 aaPredicted RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 NT5C1B-RDH14C9J2C7 533 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 NOP56O00567 594 aaKnown RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 IPO8O15397 1037 aaKnown RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 TBC1D4O60343 1298 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 PAPLNO95428 1278 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 GNAT1P11488 350 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 ITGB5P18084 799 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 CD72P21854 359 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 MARK3P27448 753 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 STARD6P59095 220 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 PPFIA1Q13136 1202 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 HTR4Q13639 388 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 UBXN2BQ14CS0 331 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 PGM5Q15124 567 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 SF3A2Q15428 464 aaKnown RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 BMP2KLQ5H9B9 411 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 LAIR1Q6GTX8 287 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 CLEC17AQ6ZS10 378 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 LURAP1LQ8IV03 231 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 IFNL3Q8IZI9 196 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 SLC39A11Q8N1S5 342 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 TRAPPC12Q8WVT3 735 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 ZNF558Q96NG5 402 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 CASD1Q96PB1 797 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 SEC62Q99442 399 aaKnown RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 RPP25Q9BUL9 199 aaKnown RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 DDX23Q9BUQ8 820 aaKnown RBP8.82□□□□□ -1
SMAD4-209ENST00000589941 FTHL17Q9BXU8 183 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 UBA5Q9GZZ9 404 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 ZBP1Q9H171 429 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 SFXN1Q9H9B4 322 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 ZNF287Q9HBT7 754 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 EBF1Q9UH73 591 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 PCDHB7Q9Y5E2 793 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 TRPV2Q9Y5S1 764 aa8.82□□□□□ -1
SMAD4-209ENST00000589941 CLUHO75153 1309 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 ABCB11O95342 1321 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 KANSL1LA0AUZ9 987 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 CFBP00751 764 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 APPP05067 770 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 SYPP08247 313 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 MYBP10242 640 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 ATP5JP18859 108 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 PTMSP20962 102 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 HOXA13P31271 388 aaPredicted RBP8.81□□□□□ -1
SMAD4-209ENST00000589941 HK2P52789 917 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 IGBP1P78318 339 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 SRSF5Q13243 272 aaKnown RBP8.81□□□□□ -1
SMAD4-209ENST00000589941 CSRP2Q16527 193 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 KIAA1211LQ6NV74 962 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 VHLLQ6RSH7 139 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 CRTC3Q6UUV7 619 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 ZPBP2Q6X784 338 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 PRR23BQ6ZRT6 265 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 CABP7Q86V35 215 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 FTSJ3Q8IY81 847 aaKnown RBP8.81□□□□□ -1
SMAD4-209ENST00000589941 ADAM2Q99965 735 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 VN1R3Q9BXE9 311 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 KLHL25Q9H0H3 589 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 CHMP4BQ9H444 224 aaKnown RBP8.81□□□□□ -1
SMAD4-209ENST00000589941 SLC2A4RGQ9NR83 387 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 ACTR10Q9NZ32 417 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 PRR13Q9NZ81 148 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 EPS15L1Q9UBC2 864 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 SUSD2Q9UGT4 822 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 PUF60Q9UHX1 559 aaKnown RBP8.81□□□□□ -1
SMAD4-209ENST00000589941 TMEM59LQ9UK28 342 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 TCFL5Q9UL49 500 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 ZNF281Q9Y2X9 895 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 NUMBLQ9Y6R0 609 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 SDK1Q7Z5N4 2213 aa8.81□□□□□ -1
SMAD4-209ENST00000589941 BAZ2BQ9UIF8 2168 aaKnown RBP8.8□□□□□ -1
SMAD4-209ENST00000589941 MYO18BQ8IUG5 2567 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 TMEM82A0PJX8 343 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 LRP3O75074 770 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 KCNK5O95279 499 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 EPHX1P07099 455 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 IFIT2P09913 472 aaKnown RBP8.8□□□□□ -1
SMAD4-209ENST00000589941 ZGLP1P0C6A0 271 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 SNHG28P0DPA3 235 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 GDNFP39905 211 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 METAP2P50579 478 aaKnown RBP eCLIP8.8□□□□□ -1
SMAD4-209ENST00000589941 HSD17B4P51659 736 aa8.8□□□□□ -1
SMAD4-209ENST00000589941 QRICH1Q2TAL8 776 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms