RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 TUBB4BP68371 445 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 PRR5P85299 388 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 TEFQ10587 303 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 MALLQ13021 153 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 PRKG1Q13976 671 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 SMC1AQ14683 1233 aaKnown RBP6.41□□□□□ -1.38
SMAD4-208ENST00000589706 ELF2Q15723 593 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 LRIT3Q3SXY7 679 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 C4orf46Q504U0 113 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 CCDC158Q5M9N0 1113 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 SUSD4Q5VX71 490 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 CCDC149Q6ZUS6 474 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 TOGARAM2Q6ZUX3 1019 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 ARMC9Q7Z3E5 817 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 MIB1Q86YT6 1006 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 WDR63Q8IWG1 891 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 C17orf53Q8N3J3 647 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-208ENST00000589706 LSM14AQ8ND56 463 aaKnown RBP6.41□□□□□ -1.38
SMAD4-208ENST00000589706 IL17REQ8NFR9 667 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 PARD3BQ8TEW8 1205 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 NRG4Q8WWG1 115 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 GTF3C6Q969F1 213 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 TNIP3Q96KP6 325 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 GDF15Q99988 308 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 INCENPQ9NQS7 918 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 PAK6Q9NQU5 681 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-208ENST00000589706 KLHL11Q9NVR0 708 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 PUF60Q9UHX1 559 aaKnown RBP6.41□□□□□ -1.38
SMAD4-208ENST00000589706 ADAM21Q9UKJ8 722 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 MYO6Q9UM54 1294 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 ABCC4O15439 1325 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 RTL9Q8NET4 1388 aa6.41□□□□□ -1.38
SMAD4-208ENST00000589706 POLR3GO15318 223 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-208ENST00000589706 EPB41L2O43491 1005 aaKnown RBP6.4□□□□□ -1.38
SMAD4-208ENST00000589706 B3GALT2O43825 422 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 ECE2O60344 883 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 OPHN1O60890 802 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 UBXN7O94888 489 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 MYL3P08590 195 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 CELA3BP08861 270 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 SDHBP21912 280 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 AK2P54819 239 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 PFKPQ01813 784 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 ADRM1Q16186 407 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 KIAA0753Q2KHM9 967 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 WLSQ5T9L3 541 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-208ENST00000589706 TTC19Q6DKK2 380 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-208ENST00000589706 OTUD7BQ6GQQ9 843 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 TEPPQ6URK8 271 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 RPTNQ6XPR3 784 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 NFXL1Q6ZNB6 911 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 CCDC50Q8IVM0 306 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 MIPOL1Q8TD10 442 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 MAGEC3Q8TD91 643 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 GAB3Q8WWW8 586 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 CABS1Q96KC9 395 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 GUCD1Q96NT3 240 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 AGAP3Q96P47 875 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 LZTS2Q9BRK4 669 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 PITHD1Q9GZP4 211 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-208ENST00000589706 MTG2Q9H4K7 406 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 GALNT8Q9NY28 637 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 SUN2Q9UH99 717 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 EVLQ9UI08 416 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-208ENST00000589706 ADAMTS6Q9UKP5 1117 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 IPPQ9Y573 584 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 PCDHB6Q9Y5E3 794 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 HCFC2Q9Y5Z7 792 aa6.4□□□□□ -1.38
SMAD4-208ENST00000589706 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.39
SMAD4-208ENST00000589706 ZNF839A8K0R7 811 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 PDLIM1O00151 329 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MSTNO14793 375 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SASH1O94885 1247 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 NTSR2O95665 410 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 CAVIN2O95810 425 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 FOSP01100 380 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 ALDH2P05091 517 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 HMOX1P09601 288 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SLC5A1P13866 664 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SPINK2P20155 84 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MX1P20591 662 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 PEX19P40855 299 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 WASP42768 502 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MAPKAPK2P49137 400 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 LMAN1P49257 510 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 GPR15P49685 360 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 MCM2P49736 904 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SLMAPQ14BN4 828 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 TBC1D25Q3MII6 688 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 BMP2KLQ5H9B9 411 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 ANKRD45Q5TZF3 282 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 DARS2Q6PI48 645 aaKnown RBP6.39□□□□□ -1.39
SMAD4-208ENST00000589706 NPNTQ6UXI9 565 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 PROSER1Q86XN7 944 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 KIAA0319LQ8IZA0 1049 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 CDYL2Q8N8U2 506 aa6.39□□□□□ -1.39
SMAD4-208ENST00000589706 SNX27Q96L92 541 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms