RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 JADE1Q6IE81 842 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 PKN3Q6P5Z2 889 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 CD302Q8IX05 232 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 CMTM8Q8IZV2 173 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 OR10T2Q8NGX3 314 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 GIPC2Q8TF65 315 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 NUP205Q92621 2012 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 MMTAG2Q9BU76 263 aaKnown RBP16.49■□□□□ 0.23
ACTN4-211ENST00000589528 SMOC1Q9H4F8 434 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 EBF3Q9H4W6 596 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 VPS45Q9NRW7 570 aa16.49■□□□□ 0.23
ACTN4-211ENST00000589528 K7ENM7 598 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 RNF40O75150 1001 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.23
ACTN4-211ENST00000589528 TOB1P50616 345 aaPredicted RBP16.48■□□□□ 0.23
ACTN4-211ENST00000589528 SMARCB1Q12824 385 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 TMEM132DQ14C87 1099 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 C9orf57Q5W0N0 161 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 FSTL4Q6MZW2 842 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 CAMKK1Q8N5S9 505 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 MAB21L3Q8N8X9 362 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 SYT2Q8N9I0 419 aaPredicted RBP16.48■□□□□ 0.23
ACTN4-211ENST00000589528 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 C2orf15Q8WU43 125 aaKnown RBP16.48■□□□□ 0.23
ACTN4-211ENST00000589528 HHIPQ96QV1 700 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 MSTO1Q9BUK6 570 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 SLC46A2Q9BY10 475 aa16.48■□□□□ 0.23
ACTN4-211ENST00000589528 ABI2Q9NYB9 513 aaPredicted RBP16.48■□□□□ 0.23
ACTN4-211ENST00000589528 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 TRDMT1O14717 391 aaKnown RBP16.47■□□□□ 0.23
ACTN4-211ENST00000589528 RHOBTB1O94844 696 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 KCNK5O95279 499 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 PLA2G4BP0C869 781 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 ATF6P18850 670 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 DRD1P21728 446 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 DDX6P26196 483 aaKnown RBP eCLIP16.47■□□□□ 0.237e-7■■■□□ 18.4
ACTN4-211ENST00000589528 NCKAP1LP55160 1127 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 IL17AQ16552 155 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 PLA2G2CQ5R387 149 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 TRIM68Q6AZZ1 485 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 PSAPL1Q6NUJ1 521 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 KCTD17Q8N5Z5 321 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 TTC16Q8NEE8 873 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 FAM83CQ9BQN1 747 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 PYM1Q9BRP8 204 aaKnown RBP16.47■□□□□ 0.23
ACTN4-211ENST00000589528 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
ACTN4-211ENST00000589528 ZCWPW1Q9H0M4 648 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 KIF9Q9HAQ2 790 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 IL21Q9HBE4 155 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 TDP1Q9NUW8 608 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 THADAQ6YHU6 1953 aa16.47■□□□□ 0.23
ACTN4-211ENST00000589528 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 CYB561D2O14569 222 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 TM4SF5O14894 197 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 FAM13AO94988 1023 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 EGFP01133 1207 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 CYP11A1P05108 521 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 NFICP08651 508 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 SCP2P22307 547 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 NMT1P30419 496 aaKnown RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 GBP1P32455 592 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 SLC12A3P55017 1021 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 CREB5Q02930 508 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 PSMD2Q13200 908 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 PLK5Q496M5 336 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 FBXO43Q4G163 708 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 HYIQ5T013 277 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 MCTP1Q6DN14 999 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 DCP1BQ8IZD4 617 aaKnown RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 MYCT1Q8N699 235 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 MRPS31Q92665 395 aaKnown RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 ZC3H10Q96K80 434 aaKnown RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 ZSCAN31Q96LW9 406 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 P2RY13Q9BPV8 354 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 EDEM2Q9BV94 578 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 HPS4Q9NQG7 708 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 ODF2LQ9ULJ1 636 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 MAGED2Q9UNF1 606 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-211ENST00000589528 CCL26Q9Y258 94 aa16.46■□□□□ 0.23
ACTN4-211ENST00000589528 MYO16Q9Y6X6 1858 aa16.46■□□□□ 0.22
ACTN4-211ENST00000589528 ABCA7Q8IZY2 2146 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 VWA3AA6NCI4 1184 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
ACTN4-211ENST00000589528 HAPLN1P10915 354 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-211ENST00000589528 ARSAP15289 507 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 TAF6P49848 677 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 NOVA1P51513 510 aaKnown RBP16.45■□□□□ 0.22
ACTN4-211ENST00000589528 TXNDC8Q6A555 127 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 TCEAL6Q6IPX3 200 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 CPA6Q8N4T0 437 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 RPLP0P6Q8NHW5 317 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 USP13Q92995 863 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-211ENST00000589528 TCEAL3Q969E4 200 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 ACDQ96AP0 544 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 PNMA5Q96PV4 448 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 ZHX3Q9H4I2 956 aa16.45■□□□□ 0.22
ACTN4-211ENST00000589528 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms