RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 FNBP1Q96RU3 617 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 SEPT5Q99719 369 aaPredicted RBP10.6□□□□□ -0.71
PTPN2-208ENST00000589216 LPIN3Q9BQK8 851 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 MRPL45Q9BRJ2 306 aaKnown RBP10.6□□□□□ -0.71
PTPN2-208ENST00000589216 RPP25Q9BUL9 199 aaKnown RBP10.6□□□□□ -0.71
PTPN2-208ENST00000589216 LRRC3Q9BY71 257 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 SMYD3Q9H7B4 428 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 ZNF334Q9HCZ1 680 aaPredicted RBP10.6□□□□□ -0.71
PTPN2-208ENST00000589216 DDX43Q9NXZ2 648 aaKnown RBP10.6□□□□□ -0.71
PTPN2-208ENST00000589216 ABI2Q9NYB9 513 aaPredicted RBP10.6□□□□□ -0.71
PTPN2-208ENST00000589216 CDH7Q9ULB5 785 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 NUMBLQ9Y6R0 609 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 TICRRQ7Z2Z1 1910 aa10.6□□□□□ -0.71
PTPN2-208ENST00000589216 ZNF638Q14966 1978 aaKnown RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 WDFY4Q6ZS81 3184 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 ANAPC1Q9H1A4 1944 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 ANHXE9PGG2 379 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 GABRDO14764 452 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 CALUO43852 315 aaPredicted RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 HUS1O60921 280 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 LRRN2O75325 713 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 COL9A1P20849 921 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 FCARP24071 287 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 LMO2P25791 158 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 RAP1GAPP47736 663 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 EPHA5P54756 1037 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 BIRC3Q13489 604 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 NFIL3Q16649 462 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 INTS6LQ5JSJ4 861 aaKnown RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 STXBP5Q5T5C0 1151 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 ISM2Q6H9L7 571 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 SCARA5Q6ZMJ2 495 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 RTL10Q7L3V2 364 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 TOP6BLQ8N6T0 577 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 SHKBP1Q8TBC3 707 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 GPR152Q8TDT2 470 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 TIGD1Q96MW7 591 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 KXD1Q9BQD3 176 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 OXCT2Q9BYC2 517 aaPredicted RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 CRTAC1Q9NQ79 661 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 AVENQ9NQS1 362 aaPredicted RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■□□□□ 9.3
PTPN2-208ENST00000589216 MAN1B1Q9UKM7 699 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 MRPS23Q9Y3D9 190 aaKnown RBP10.59□□□□□ -0.71
PTPN2-208ENST00000589216 CACNA1HO95180 2353 aa10.59□□□□□ -0.71
PTPN2-208ENST00000589216 HELZP42694 1942 aaKnown RBP10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MYO16Q9Y6X6 1858 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MYBPHLA2RUH7 354 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 BIN1O00499 593 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 PRPF40AO75400 957 aaKnown RBP10.58□□□□□ -0.72
PTPN2-208ENST00000589216 C4BPAP04003 597 aaKnown RBP10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MYL4P12829 197 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 PTPN2P17706 415 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
PTPN2-208ENST00000589216 PPP3CAQ08209 521 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MYO1EQ12965 1108 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 TDGQ13569 410 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 ZACNQ401N2 412 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 IER5LQ5T953 404 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 ZNF658Q5TYW1 1059 aaPredicted RBP10.58□□□□□ -0.72
PTPN2-208ENST00000589216 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 SV2AQ7L0J3 742 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 FAM186BQ8IYM0 893 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 THEM5Q8N1Q8 247 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 TMEM86AQ8N2M4 240 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 TMC2Q8TDI7 906 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 SMARCE1Q969G3 411 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MCRS1Q96EZ8 462 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 ZSWIM3Q96MP5 696 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 SYT15Q9BQS2 421 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 PI4K2AQ9BTU6 479 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 SDCBP2Q9H190 292 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 DPEP3Q9H4B8 488 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPN2-208ENST00000589216 ASAH2Q9NR71 780 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 RMND1Q9NWS8 449 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 HMGXB4Q9UGU5 601 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 GTF3C4Q9UKN8 822 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 MAFFQ9ULX9 164 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 DUSP12Q9UNI6 340 aa10.58□□□□□ -0.72
PTPN2-208ENST00000589216 A0A1W2PRU2 124 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 PHACTR2O75167 634 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 KIF20AO95235 890 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 SMC2O95347 1197 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 STAU1O95793 577 aaKnown RBP10.57□□□□□ -0.72
PTPN2-208ENST00000589216 HAPLN1P10915 354 aaPredicted RBP10.57□□□□□ -0.72
PTPN2-208ENST00000589216 WARSP23381 471 aaKnown RBP10.57□□□□□ -0.72
PTPN2-208ENST00000589216 CYP2F1P24903 491 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 GCLMP48507 274 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 VAMP7P51809 220 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 MYL7Q01449 175 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 TSPY1Q01534 308 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 PLD1Q13393 1074 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 NCOA4Q13772 614 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 TEAD2Q15562 447 aa10.57□□□□□ -0.72
PTPN2-208ENST00000589216 ZNF699Q32M78 642 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms