RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ZNF572Q7Z3I7 529 aaPredicted RBP12.81□□□□□ -0.36
CCBE1-203ENST00000589116 LIMS2Q7Z4I7 341 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 CTAGE6Q86UF2 777 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 CTAGE4Q8IX94 777 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 GSTCDQ8NEC7 633 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 TWNKQ96RR1 684 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 GAD1Q99259 594 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 MRPL47Q9HD33 250 aaKnown RBP12.81□□□□□ -0.36
CCBE1-203ENST00000589116 RGS18Q9NS28 235 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 HMGXB4Q9UGU5 601 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 SCINQ9Y6U3 715 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 TDRD15B5MCY1 1934 aaKnown RBP12.81□□□□□ -0.36
CCBE1-203ENST00000589116 TANC1Q9C0D5 1861 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 LAMA3Q16787 3333 aa12.81□□□□□ -0.36
CCBE1-203ENST00000589116 MEIS3P2A8K0S8 358 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 SRGAP2O75044 1071 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 PAX3P23760 479 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 RPL9P32969 192 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 ITIH3Q06033 890 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 PTP4A2Q12974 167 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 MBTPS1Q14703 1052 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 CNGA2Q16280 664 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 SOWAHAQ2M3V2 549 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 ZNF598Q86UK7 904 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 ECHDC2Q86YB7 292 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 CREG2Q8IUH2 290 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 MSANTD4Q8NCY6 345 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 C1orf131Q8NDD1 294 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 UBXN4Q92575 508 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 LPPQ93052 612 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 HES6Q96HZ4 224 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 PBKQ96KB5 322 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 C11orf70Q9BRQ4 267 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 GOLGA2P5Q9HBQ8 144 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 STRIP2Q9ULQ0 834 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 MIF4GDA9UHW6 222 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 O00370 1275 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 EOMESO95936 686 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 RRM1P23921 792 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 BMP8BP34820 402 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 PAFAH1B1P43034 410 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 LILRA4P59901 499 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 GRIK3Q13003 919 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 PLEKHA7Q6IQ23 1121 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 MMS22LQ6ZRQ5 1243 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 SLC24A5Q71RS6 500 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 LRRN4CLQ8ND94 238 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 APPL2Q8NEU8 664 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 HEXIM2Q96MH2 286 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 MRPL45Q9BRJ2 306 aaKnown RBP12.8□□□□□ -0.36
CCBE1-203ENST00000589116 CRISPLD2Q9H0B8 497 aa12.8□□□□□ -0.36
CCBE1-203ENST00000589116 C9IYK1 514 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 SPTLC1O15269 473 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 HUS1O60921 280 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 PARNO95453 639 aaKnown RBP12.79□□□□□ -0.36
CCBE1-203ENST00000589116 COL9A1P20849 921 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 SCNN1GP51170 649 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 GSCP56915 257 aaPredicted RBP12.79□□□□□ -0.36
CCBE1-203ENST00000589116 TAP1Q03518 808 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 LRIT3Q3SXY7 679 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 CCDC181Q5TID7 509 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 DENND1BQ6P3S1 775 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 LCLAT1Q6UWP7 414 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 ANKRD33Q7Z3H0 272 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
CCBE1-203ENST00000589116 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 UROC1Q96N76 676 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 GOLPH3Q9H4A6 298 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 PARVAQ9NVD7 372 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 PACSIN2Q9UNF0 486 aaPredicted RBP12.79□□□□□ -0.36
CCBE1-203ENST00000589116 ALG6Q9Y672 507 aa12.79□□□□□ -0.36
CCBE1-203ENST00000589116 FAM170AA1A519 330 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 PODXLO00592 558 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 ZNF185O15231 689 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 MICAL2O94851 1124 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 COL6A1P12109 1028 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 WARSP23381 471 aaKnown RBP12.78□□□□□ -0.36
CCBE1-203ENST00000589116 SSTR3P32745 418 aaPredicted RBP12.78□□□□□ -0.36
CCBE1-203ENST00000589116 FAM189BP81408 668 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 C1orf53Q5VUE5 145 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 ARHGAP17Q68EM7 881 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 ERICH1Q86X53 443 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 CRYBG2Q8N1P7 616 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 WDTC1Q8N5D0 677 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 OR6B3Q8NGW1 331 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 APBB2Q92870 758 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms