RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 DUSP12Q9UNI6 340 aa16.62■□□□□ 0.25
GCDH-208ENST00000588905 FRMD4BQ9Y2L6 1034 aa16.62■□□□□ 0.25
GCDH-208ENST00000588905 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
GCDH-208ENST00000588905 VPS13AQ96RL7 3174 aa16.62■□□□□ 0.25
GCDH-208ENST00000588905 CFAP54Q96N23 3096 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 LRRIQ3A6PVS8 624 aaPredicted RBP16.61■□□□□ 0.25
GCDH-208ENST00000588905 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
GCDH-208ENST00000588905 EPHB3P54753 998 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 DLG4P78352 724 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 HTR4Q13639 388 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 SLC5A9Q2M3M2 681 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 SLC39A12Q504Y0 691 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 C1orf220Q5T0J3 134 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 CYP4A22Q5TCH4 519 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 PDZD4Q76G19 769 aaPredicted RBP16.61■□□□□ 0.25
GCDH-208ENST00000588905 SUGP1Q8IWZ8 645 aaKnown RBP16.61■□□□□ 0.25
GCDH-208ENST00000588905 NPAS3Q8IXF0 933 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 DCP1BQ8IZD4 617 aaKnown RBP16.61■□□□□ 0.25
GCDH-208ENST00000588905 TOP6BLQ8N6T0 577 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 LEMD2Q8NC56 503 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 SPATA18Q8TC71 538 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 TMC2Q8TDI7 906 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 ING5Q8WYH8 240 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 GTPBP4Q9BZE4 634 aaKnown RBP16.61■□□□□ 0.25
GCDH-208ENST00000588905 FAM86C1Q9NVL1 165 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 GDE1Q9NZC3 331 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 SLC27A5Q9Y2P5 690 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 NOTCH4Q99466 2003 aa16.61■□□□□ 0.25
GCDH-208ENST00000588905 MAPK13O15264 365 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 MICAL2O94851 1124 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 C4BPAP04003 597 aaKnown RBP16.6■□□□□ 0.25
GCDH-208ENST00000588905 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
GCDH-208ENST00000588905 TUFMP49411 452 aaKnown RBP16.6■□□□□ 0.25
GCDH-208ENST00000588905 PMS1P54277 932 aaKnown RBP16.6■□□□□ 0.25
GCDH-208ENST00000588905 TSPY1Q01534 308 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 MORC3Q14149 939 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 CAMK4Q16566 473 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 SOWAHAQ2M3V2 549 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 EDRF1Q3B7T1 1238 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 PRSS36Q5K4E3 855 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 MTSS1LQ765P7 747 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 DPH6Q7L8W6 267 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 LIMS2Q7Z4I7 341 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 LRRTM3Q86VH5 581 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 HS6ST3Q8IZP7 471 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 C2orf15Q8WU43 125 aaKnown RBP16.6■□□□□ 0.25
GCDH-208ENST00000588905 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 ASAH2Q9NR71 780 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 ASB3Q9Y575 518 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 NUMBLQ9Y6R0 609 aa16.6■□□□□ 0.25
GCDH-208ENST00000588905 ZFHX2Q9C0A1 2572 aaPredicted RBP16.6■□□□□ 0.25
GCDH-208ENST00000588905 BIN1O00499 593 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 NARSO43776 548 aaKnown RBP16.59■□□□□ 0.25
GCDH-208ENST00000588905 CEBPBP17676 345 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 PSMC2P35998 433 aaKnown RBP16.59■□□□□ 0.25
GCDH-208ENST00000588905 LHX1P48742 406 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 AP3M2P53677 418 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 EPHA5P54756 1037 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 PTPN5P54829 565 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
GCDH-208ENST00000588905 MYL7Q01449 175 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 TDRD10Q5VZ19 366 aaKnown RBP16.59■□□□□ 0.25
GCDH-208ENST00000588905 PARM1Q6UWI2 310 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 FAM186BQ8IYM0 893 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 ADGRF2Q8IZF7 708 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 TTC9BQ8N6N2 239 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 TMEM105Q8N8V8 129 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 ST13P5Q8NFI4 369 aaPredicted RBP16.59■□□□□ 0.25
GCDH-208ENST00000588905 SPPL2BQ8TCT7 592 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 FGF14Q92915 247 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 TCEAL4Q96EI5 215 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 DDX43Q9NXZ2 648 aaKnown RBP16.59■□□□□ 0.25
GCDH-208ENST00000588905 MYO15AQ9UKN7 3530 aa16.59■□□□□ 0.25
GCDH-208ENST00000588905 PPP1R3GB7ZBB8 358 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 GABRDO14764 452 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 IKBKBO14920 756 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 SRFP11831 508 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 MYL4P12829 197 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 CCR2P41597 374 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 VAMP7P51809 220 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 MYL6P60660 151 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 TRPC3Q13507 836 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 NFE2Q16621 373 aaPredicted RBP16.58■□□□□ 0.24
GCDH-208ENST00000588905 MGAT5BQ3V5L5 792 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 OSTM1Q86WC4 334 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 DHTKD1Q96HY7 919 aaPredicted RBP16.58■□□□□ 0.24
GCDH-208ENST00000588905 SEPT5Q99719 369 aaPredicted RBP16.58■□□□□ 0.24
GCDH-208ENST00000588905 RPP25Q9BUL9 199 aaKnown RBP16.58■□□□□ 0.24
GCDH-208ENST00000588905 XYLT2Q9H1B5 865 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 DNAJC25Q9H1X3 360 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 KIAA1468Q9P260 1216 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 FBXL21Q9UKT6 434 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 PCDHB5Q9Y5E4 795 aa16.58■□□□□ 0.24
GCDH-208ENST00000588905 COL4A3Q01955 1670 aa16.57■□□□□ 0.24
GCDH-208ENST00000588905 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
GCDH-208ENST00000588905 CETN3O15182 167 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms