RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TMEM174Q8WUU8 243 aa15.52■□□□□ 0.08
DDX39A-208ENST00000588692 CCDC47Q96A33 483 aaKnown RBP15.52■□□□□ 0.08
DDX39A-208ENST00000588692 HPDLQ96IR7 371 aa15.52■□□□□ 0.08
DDX39A-208ENST00000588692 SHDQ96IW2 340 aa15.52■□□□□ 0.08
DDX39A-208ENST00000588692 ASB16Q96NS5 453 aa15.52■□□□□ 0.08
DDX39A-208ENST00000588692 CGRRF1Q99675 332 aa15.52■□□□□ 0.08
DDX39A-208ENST00000588692 SEPT5Q99719 369 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-208ENST00000588692 LRRC3Q9BY71 257 aa15.52■□□□□ 0.08
DDX39A-208ENST00000588692 EXOC3O60645 756 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 KIF20AO95235 890 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 DLATP10515 647 aaKnown RBP15.52■□□□□ 0.07
DDX39A-208ENST00000588692 TNNI1P19237 187 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 FCARP24071 287 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 PCSK1P29120 753 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.07
DDX39A-208ENST00000588692 LHX1P48742 406 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 NUCB2P80303 420 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 FAM78AQ5JUQ0 283 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 TRAPPC11Q7Z392 1133 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 LRRTM3Q86VH5 581 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 ADGRF2Q8IZF7 708 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 FSIP1Q8NA03 581 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 SHKBP1Q8TBC3 707 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 SMARCD2Q92925 531 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 CCDC34Q96HJ3 373 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 FAM84AQ96KN4 292 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 TBC1D17Q9HA65 648 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 TRPV4Q9HBA0 871 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 ZFP14Q9HCL3 533 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 DDX43Q9NXZ2 648 aaKnown RBP15.52■□□□□ 0.07
DDX39A-208ENST00000588692 PCDHB5Q9Y5E4 795 aa15.52■□□□□ 0.07
DDX39A-208ENST00000588692 PIEZO1Q92508 2521 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 NUP210Q8TEM1 1887 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-208ENST00000588692 STK25O00506 426 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 GABRDO14764 452 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 RPN1P04843 607 aaKnown RBP15.51■□□□□ 0.07
DDX39A-208ENST00000588692 HAPLN1P10915 354 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-208ENST00000588692 ATF6P18850 670 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 PRKCQQ04759 706 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 TEAD2Q15562 447 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 INTS6LQ5JSJ4 861 aaKnown RBP15.51■□□□□ 0.07
DDX39A-208ENST00000588692 TANGO2Q6ICL3 276 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 POTEHQ6S545 545 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 KRBA2Q6ZNG9 492 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 LIMS2Q7Z4I7 341 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 DNAJB7Q7Z6W7 309 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-208ENST00000588692 SLC9A9Q8IVB4 645 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 FAM200AQ8TCP9 573 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 E2F7Q96AV8 911 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 CCDC127Q96BQ5 260 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 SLITRK6Q9H5Y7 841 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 ABCB6Q9NP58 842 aa15.51■□□□□ 0.07
DDX39A-208ENST00000588692 ABI2Q9NYB9 513 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-208ENST00000588692 CACNA1HO95180 2353 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 A0A1W2PRU2 124 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 PDXKO00764 312 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 SOAT2O75908 522 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 RHOBTB3O94955 611 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 GJA1P17302 382 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 STARD6P59095 220 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 MLF2Q15773 248 aaPredicted RBP15.5■□□□□ 0.07
DDX39A-208ENST00000588692 SOWAHAQ2M3V2 549 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 CCDC105Q8IYK2 499 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 ZSCAN18Q8TBC5 510 aaPredicted RBP15.5■□□□□ 0.07
DDX39A-208ENST00000588692 DEPDC1BQ8WUY9 529 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 DNASE1L2Q92874 299 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 GCNAQ96QF7 691 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 KCTD10Q9H3F6 313 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 MIA3Q5JRA6 1907 aa15.5■□□□□ 0.07
DDX39A-208ENST00000588692 NRG2O14511 850 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-208ENST00000588692 PI15O43692 258 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 CDC25CP30307 473 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 AP3M2P53677 418 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 DPYDQ12882 1025 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 TAF12Q16514 161 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 ARHGAP15Q53QZ3 475 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 SCARA3Q6AZY7 606 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 FUBP3Q96I24 572 aaKnown RBP eCLIP15.49■□□□□ 0.07
DDX39A-208ENST00000588692 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 PKMYT1Q99640 499 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 LPIN3Q9BQK8 851 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 PLA2G2FQ9BZM2 168 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 GOLPH3LQ9H4A5 285 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 ZNF334Q9HCZ1 680 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-208ENST00000588692 TMLHEQ9NVH6 421 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 DMAC2Q9NW81 257 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 ZMYM5Q9UJ78 669 aa15.49■□□□□ 0.07
DDX39A-208ENST00000588692 ZNF202O95125 648 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 STAU1O95793 577 aaKnown RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 FAM163BP0C2L3 166 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 PSMC3P17980 439 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 ACAT1P24752 427 aaKnown RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 GABRR2P28476 465 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 RPL10AP62906 217 aaKnown RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 KCNB1Q14721 858 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 MAPRE1Q15691 268 aaKnown RBP15.48■□□□□ 0.07
DDX39A-208ENST00000588692 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 SLC44A4Q53GD3 710 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 GAREM2Q75VX8 874 aa15.48■□□□□ 0.07
DDX39A-208ENST00000588692 OSTM1Q86WC4 334 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms