RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ACOT2P49753 483 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 MCM6Q14566 821 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 CSRP2Q16527 193 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 ARMCX5Q6P1M9 558 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 PRR23CQ6ZRP0 262 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 EFCAB13Q8IY85 973 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 RAD54LQ92698 747 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 TMX3Q96JJ7 454 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 SLC46A2Q9BY10 475 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 SMG9Q9H0W8 520 aaKnown RBP19.93■□□□□ 0.78
CCDC43-204ENST00000588687 ST6GALNAC4Q9H4F1 302 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 ASB7Q9H672 318 aa19.93■□□□□ 0.78
CCDC43-204ENST00000588687 GJB2P29033 226 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 CDC25CP30307 473 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 MCM2P49736 904 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 PLCB2Q00722 1185 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 KARSQ15046 597 aaKnown RBP19.92■□□□□ 0.78
CCDC43-204ENST00000588687 ZC2HC1CQ53FD0 456 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-204ENST00000588687 ARHGAP15Q53QZ3 475 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 HEATR6Q6AI08 1181 aaKnown RBP19.92■□□□□ 0.78
CCDC43-204ENST00000588687 CRELD2Q6UXH1 353 aaPredicted RBP19.92■□□□□ 0.78
CCDC43-204ENST00000588687 WDR5BQ86VZ2 330 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 FAM212AQ96EL1 285 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 FAM83CQ9BQN1 747 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 HPS4Q9NQG7 708 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 CEP295Q9C0D2 2601 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 MYO16Q9Y6X6 1858 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 ASPMQ8IZT6 3477 aa19.92■□□□□ 0.78
CCDC43-204ENST00000588687 OTOL1A6NHN0 477 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 DPYSL4O14531 572 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 GDF9O60383 454 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 PPP1R37O75864 691 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 HAPLN1P10915 354 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 HMGA1P17096 107 aaKnown RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 ADSSP30520 456 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 TUFMP49411 452 aaKnown RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 WNT7BP56706 349 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 DHX8Q14562 1220 aaKnown RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 RABEP1Q15276 862 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 MGAT5BQ3V5L5 792 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 WSCD1Q658N2 575 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 SYNPOQ8N3V7 929 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 FAM160A2Q8N612 972 aaPredicted RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 C2orf15Q8WU43 125 aaKnown RBP19.91■□□□□ 0.78
CCDC43-204ENST00000588687 CALML4Q96GE6 196 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 DSEQ9UL01 958 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 CCL26Q9Y258 94 aa19.91■□□□□ 0.78
CCDC43-204ENST00000588687 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.9■□□□□ 0.78
CCDC43-204ENST00000588687 CYB561D2O14569 222 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 EXTL3O43909 919 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 TADA3O75528 432 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 UBA7P41226 1012 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 TAF6P49848 677 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 VEPH1Q14D04 833 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 ITPRIPL2Q3MIP1 535 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 TMEM196Q5HYL7 178 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 CMTM8Q8IZV2 173 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 SPPL2BQ8TCT7 592 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 LARP4BQ92615 738 aaKnown RBP19.9■□□□□ 0.78
CCDC43-204ENST00000588687 PYM1Q9BRP8 204 aaKnown RBP19.9■□□□□ 0.78
CCDC43-204ENST00000588687 STRA6Q9BX79 667 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 TMLHEQ9NVH6 421 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 ZNF638Q14966 1978 aaKnown RBP19.9■□□□□ 0.78
CCDC43-204ENST00000588687 SDK1Q7Z5N4 2213 aa19.9■□□□□ 0.78
CCDC43-204ENST00000588687 CHD6Q8TD26 2715 aa19.89■□□□□ 0.78
CCDC43-204ENST00000588687 TBCAO75347 108 aaKnown RBP19.89■□□□□ 0.77
CCDC43-204ENST00000588687 F11P03951 625 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 ABCD1P33897 745 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 LONP1P36776 959 aaKnown RBP19.89■□□□□ 0.77
CCDC43-204ENST00000588687 NLRP12P59046 1061 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 POU5F1Q01860 360 aaKnown RBP19.89■□□□□ 0.77
CCDC43-204ENST00000588687 SMARCB1Q12824 385 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 ADALQ6DHV7 355 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 FSTL4Q6MZW2 842 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 STKLD1Q8NE28 680 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 GIPC2Q8TF65 315 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 USP13Q92995 863 aaPredicted RBP19.89■□□□□ 0.77
CCDC43-204ENST00000588687 DPP3Q9NY33 737 aa19.89■□□□□ 0.77
CCDC43-204ENST00000588687 AGO2Q9UKV8 859 aaKnown RBP19.89■□□□□ 0.77
CCDC43-204ENST00000588687 WDFY3Q8IZQ1 3526 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 H3BQV1 296 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 KRT37O76014 449 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 PPM1JQ5JR12 505 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 SCARA3Q6AZY7 606 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 TRIM68Q6AZZ1 485 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 CXorf38Q8TB03 319 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 FAM200AQ8TCP9 573 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 GCNAQ96QF7 691 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 PKMYT1Q99640 499 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 ABI2Q9NYB9 513 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-204ENST00000588687 ZMYM5Q9UJ78 669 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 ANAPC1Q9H1A4 1944 aa19.88■□□□□ 0.77
CCDC43-204ENST00000588687 ATG2BQ96BY7 2078 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 HELZP42694 1942 aaKnown RBP19.87■□□□□ 0.77
CCDC43-204ENST00000588687 KPNA7A9QM74 516 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 GPR15P49685 360 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 KCNA1Q09470 495 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 USP49Q70CQ1 688 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 ZNF720Q7Z2F6 126 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms