RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 CXorf49A8MYA2 514 aaPredicted RBP8.78□□□□□ -1
VMP1-208ENST00000588617 K7ENM7 598 aa8.78□□□□□ -1
VMP1-208ENST00000588617 TBX18O95935 607 aa8.78□□□□□ -1
VMP1-208ENST00000588617 WNT11O96014 354 aa8.78□□□□□ -1
VMP1-208ENST00000588617 CD97P48960 835 aa8.78□□□□□ -1
VMP1-208ENST00000588617 RRADP55042 308 aa8.78□□□□□ -1
VMP1-208ENST00000588617 SETQ01105 290 aaPredicted RBP8.78□□□□□ -1
VMP1-208ENST00000588617 MAPK7Q13164 816 aa8.78□□□□□ -1
VMP1-208ENST00000588617 DLGAP5Q15398 846 aa8.78□□□□□ -1
VMP1-208ENST00000588617 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.78□□□□□ -1
VMP1-208ENST00000588617 GPATCH4Q5T3I0 446 aaKnown RBP8.78□□□□□ -1
VMP1-208ENST00000588617 FRMD5Q7Z6J6 570 aa8.78□□□□□ -1
VMP1-208ENST00000588617 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
VMP1-208ENST00000588617 ANKRD53Q8N9V6 530 aa8.78□□□□□ -1
VMP1-208ENST00000588617 OR1N1Q8NGS0 311 aa8.78□□□□□ -1
VMP1-208ENST00000588617 RPL10LQ96L21 214 aaKnown RBP8.78□□□□□ -1
VMP1-208ENST00000588617 TINAGL1Q9GZM7 467 aaPredicted RBP8.78□□□□□ -1
VMP1-208ENST00000588617 PABPC3Q9H361 631 aaKnown RBP8.78□□□□□ -1
VMP1-208ENST00000588617 TAF1DQ9H5J8 278 aaPredicted RBP8.78□□□□□ -1
VMP1-208ENST00000588617 PLEKHA5Q9HAU0 1116 aa8.78□□□□□ -1
VMP1-208ENST00000588617 ZFP64Q9NPA5 681 aa8.78□□□□□ -1
VMP1-208ENST00000588617 ASAP1Q9ULH1 1129 aa8.78□□□□□ -1
VMP1-208ENST00000588617 AGAP1Q9UPQ3 857 aa8.78□□□□□ -1
VMP1-208ENST00000588617 LOC102723971A0A1B0GUV8 181 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 KIAA1324LA8MWY0 1029 aaPredicted RBP8.77□□□□□ -1.01
VMP1-208ENST00000588617 ANXA1P04083 346 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 JUPP14923 745 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 TPH1P17752 444 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 GZMKP49863 264 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 CPT1AP50416 773 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 PNLIPRP1P54315 467 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 PRKAA2P54646 552 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 AP2B1P63010 937 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 PRKG2Q13237 762 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 NBPF8Q3BBV2 869 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 UTP14CQ5TAP6 766 aaKnown RBP8.77□□□□□ -1.01
VMP1-208ENST00000588617 PLAG1Q6DJT9 500 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 C16orf54Q6UWD8 224 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 DSTYKQ6XUX3 929 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 KRT73Q86Y46 540 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 FAM46DQ8NEK8 389 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 THAP4Q8WY91 577 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 HVCN1Q96D96 273 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 RRP36Q96EU6 259 aaKnown RBP8.77□□□□□ -1.01
VMP1-208ENST00000588617 COG8Q96MW5 612 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 PPP1R9BQ96SB3 815 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 BARD1Q99728 777 aaKnown RBP8.77□□□□□ -1.01
VMP1-208ENST00000588617 OR10A2Q9H208 303 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 SLC6A15Q9H2J7 730 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 ZSCAN32Q9NX65 697 aa8.77□□□□□ -1.01
VMP1-208ENST00000588617 H7C4K7 107 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 HAUS5O94927 633 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 PIM1P11309 404 aaPredicted RBP8.76□□□□□ -1.01
VMP1-208ENST00000588617 CKBP12277 381 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 PECAM1P16284 738 aaPredicted RBP8.76□□□□□ -1.01
VMP1-208ENST00000588617 ITGB5P18084 799 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 ATICP31939 592 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 AARSP49588 968 aaKnown RBP eCLIP8.76□□□□□ -1.01
VMP1-208ENST00000588617 CDR1P51861 262 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 NR1H2P55055 460 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 RAP2BP61225 183 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 NUCB1Q02818 461 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 DUSP8Q13202 625 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SLC12A1Q13621 1099 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 LRP8Q14114 963 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 ARHGEF7Q14155 803 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SURF1Q15526 300 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 AGAP9Q5VTM2 703 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 ITPRIPL1Q6GPH6 555 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SLC44A2Q8IWA5 706 aaPredicted RBP8.76□□□□□ -1.01
VMP1-208ENST00000588617 CMTM4Q8IZR5 234 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SCAMP5Q8TAC9 235 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SLC35B2Q8TB61 432 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SMCR8Q8TEV9 937 aaPredicted RBP8.76□□□□□ -1.01
VMP1-208ENST00000588617 UCMAQ8WVF2 138 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 SCAMP4Q969E2 229 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 RTKNQ9BST9 563 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 DDX23Q9BUQ8 820 aaKnown RBP8.76□□□□□ -1.01
VMP1-208ENST00000588617 CARD11Q9BXL7 1154 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 CPEB1Q9BZB8 566 aaKnown RBP8.76□□□□□ -1.01
VMP1-208ENST00000588617 GSTO2Q9H4Y5 243 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 L2HGDHQ9H9P8 463 aa8.76□□□□□ -1.01
VMP1-208ENST00000588617 CCER2I3L3R5 266 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 DNPH1O43598 174 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 GFPT2O94808 682 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 DDX58O95786 925 aaKnown RBP8.75□□□□□ -1.01
VMP1-208ENST00000588617 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
VMP1-208ENST00000588617 ALAS1P13196 640 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 RXRAP19793 462 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 ADCY7P51828 1080 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 UBE3AQ05086 875 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 ATPAF1Q5TC12 328 aaPredicted RBP8.75□□□□□ -1.01
VMP1-208ENST00000588617 FAXCQ5TGI0 409 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 AGBL4Q5VU57 503 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 SLC17A8Q8NDX2 589 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 SPATA5L1Q9BVQ7 753 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 SIK2Q9H0K1 926 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 PRDM8Q9NQV8 689 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms