RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 SRSF5Q13243 272 aaKnown RBP18.15■□□□□ 0.5
LINC01842-201ENST00000588275 DGKKQ5KSL6 1271 aa18.15■□□□□ 0.5
LINC01842-201ENST00000588275 WSCD1Q658N2 575 aa18.15■□□□□ 0.5
LINC01842-201ENST00000588275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.15■□□□□ 0.5
LINC01842-201ENST00000588275 RALGPS2Q86X27 583 aaPredicted RBP18.15■□□□□ 0.5
LINC01842-201ENST00000588275 CELF5Q8N6W0 485 aaKnown RBP18.15■□□□□ 0.5
LINC01842-201ENST00000588275 HSFX1Q9UBD0 423 aa18.15■□□□□ 0.5
LINC01842-201ENST00000588275 DDIT3P35638 169 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 MCM2P49736 904 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 SV2CQ496J9 727 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 WDR44Q5JSH3 913 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 EFCAB13Q8IY85 973 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 SPPL2BQ8TCT7 592 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 NOC3LQ8WTT2 800 aaKnown RBP18.14■□□□□ 0.49
LINC01842-201ENST00000588275 EPSTI1Q96J88 318 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 IL21Q9HBE4 155 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 THG1LQ9NWX6 298 aaKnown RBP18.14■□□□□ 0.49
LINC01842-201ENST00000588275 OBP2AQ9NY56 170 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 TBC1D7Q9P0N9 293 aa18.14■□□□□ 0.49
LINC01842-201ENST00000588275 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.14■□□□□ 0.49
LINC01842-201ENST00000588275 DCDC2BA2VCK2 349 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 TGM1P22735 817 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 PLCB2Q00722 1185 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 LRRTM3Q86VH5 581 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 LONP2Q86WA8 852 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 DCP1BQ8IZD4 617 aaKnown RBP18.13■□□□□ 0.49
LINC01842-201ENST00000588275 STKLD1Q8NE28 680 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 C2orf15Q8WU43 125 aaKnown RBP18.13■□□□□ 0.49
LINC01842-201ENST00000588275 ZNF560Q96MR9 790 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 CCSER1Q9C0I3 900 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 MRPL44Q9H9J2 332 aaKnown RBP18.13■□□□□ 0.49
LINC01842-201ENST00000588275 C2orf42Q9NWW7 574 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
LINC01842-201ENST00000588275 MAGED2Q9UNF1 606 aaPredicted RBP18.13■□□□□ 0.49
LINC01842-201ENST00000588275 ZNF638Q14966 1978 aaKnown RBP18.13■□□□□ 0.49
LINC01842-201ENST00000588275 SPTBN2O15020 2390 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 KPNA7A9QM74 516 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 HRO43593 1189 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 IL18RAPO95256 599 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 RETP07949 1114 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 HAPLN1P10915 354 aaPredicted RBP18.12■□□□□ 0.49
LINC01842-201ENST00000588275 AVPR1AP37288 418 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 TFAMQ00059 246 aaKnown RBP18.12■□□□□ 0.49
LINC01842-201ENST00000588275 TSPY1Q01534 308 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 ITPRIPL2Q3MIP1 535 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 CRELD2Q6UXH1 353 aaPredicted RBP18.12■□□□□ 0.49
LINC01842-201ENST00000588275 CEP68Q76N32 757 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 ZNF720Q7Z2F6 126 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 MAB21L3Q8N8X9 362 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 HVCN1Q96D96 273 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 SAAL1Q96ER3 474 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 FAM213AQ9BRX8 229 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 RTKNQ9BST9 563 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 SLC46A2Q9BY10 475 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 ST6GALNAC4Q9H4F1 302 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 PCDHB5Q9Y5E4 795 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 CLIC4Q9Y696 253 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 STYXL1Q9Y6J8 313 aa18.12■□□□□ 0.49
LINC01842-201ENST00000588275 K7ESF4 209 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 PRPF40AO75400 957 aaKnown RBP18.11■□□□□ 0.49
LINC01842-201ENST00000588275 GCNT3O95395 438 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 ADSSP30520 456 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 POLR2BP30876 1174 aaKnown RBP18.11■□□□□ 0.49
LINC01842-201ENST00000588275 HOXC13P31276 330 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 GPR15P49685 360 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 KCNA1Q09470 495 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 SMARCB1Q12824 385 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 BFSP1Q12934 665 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 CCINQ13939 588 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 POSTNQ15063 836 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 SDHAF4Q5VUM1 108 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 TRIM68Q6AZZ1 485 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 CMTM8Q8IZV2 173 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 TTC16Q8NEE8 873 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 PI4K2AQ9BTU6 479 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 TMLHEQ9NVH6 421 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 STK17AQ9UEE5 414 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 EXOC7Q9UPT5 735 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 RALGAPA1Q6GYQ0 2036 aa18.11■□□□□ 0.49
LINC01842-201ENST00000588275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.1■□□□□ 0.49
LINC01842-201ENST00000588275 ITGB3P05106 788 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 IDEP14735 1019 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 TXLNAP40222 546 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 WNT7BP56706 349 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 CEBPZQ03701 1054 aaKnown RBP18.1■□□□□ 0.49
LINC01842-201ENST00000588275 RRAGBQ5VZM2 374 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 SYCP3Q8IZU3 236 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 ZSWIM2Q8NEG5 633 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 FAM84AQ96KN4 292 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 CLIC6Q96NY7 704 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 ACCSQ96QU6 501 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 EBF3Q9H4W6 596 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 SEMA4GQ9NTN9 838 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 AGAP1Q9UPQ3 857 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 CCL26Q9Y258 94 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 DENND4CQ5VZ89 1909 aa18.1■□□□□ 0.49
LINC01842-201ENST00000588275 OBSL1O75147 1896 aa18.09■□□□□ 0.49
LINC01842-201ENST00000588275 GOLGA8IPA6NC78 632 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms