RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MYO16Q9Y6X6 1858 aa14.95□□□□□ -0.02
CLPTM1-208ENST00000588274 NMT1P30419 496 aaKnown RBP14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 LIG4P49917 911 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 ZRSR1Q15695 479 aaKnown RBP14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 KYAT1Q16773 422 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 TRIM68Q6AZZ1 485 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 ITIH5Q86UX2 942 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 KBTBD6Q86V97 674 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 CMTM8Q8IZV2 173 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 FAM184AQ8NB25 1140 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 STKLD1Q8NE28 680 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 USP13Q92995 863 aaPredicted RBP14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 ZSCAN31Q96LW9 406 aaPredicted RBP14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 SEPT5Q99719 369 aaPredicted RBP14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 IKZF4Q9H2S9 585 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 RPF1Q9H9Y2 349 aaKnown RBP14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 TMLHEQ9NVH6 421 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 KCNG1Q9UIX4 513 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 DERAQ9Y315 318 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 STYXL1Q9Y6J8 313 aa14.94□□□□□ -0.02
CLPTM1-208ENST00000588274 VWA3AA6NCI4 1184 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 ANKRD63C9JTQ0 380 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 H0YCG3 227 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 K7ENM7 598 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 TRDMT1O14717 391 aaKnown RBP14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 XPOTO43592 962 aaKnown RBP14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 FOXD2O60548 495 aaPredicted RBP14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 F11P03951 625 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 ZNF806P0C7X5 589 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 HAPLN1P10915 354 aaPredicted RBP14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 CDC25CP30307 473 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 WNT7BP56706 349 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 SHC2P98077 582 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 ARHGAP15Q53QZ3 475 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 N4BP2L1Q5TBK1 243 aaPredicted RBP14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 SCARA3Q6AZY7 606 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 CRELD2Q6UXH1 353 aaPredicted RBP14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 EFCAB13Q8IY85 973 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 BICD1Q96G01 975 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 LOXL4Q96JB6 756 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 MSTO1Q9BUK6 570 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 ARRDC1-AS1Q9H2J1 176 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 C2CD2Q9Y426 696 aa14.93□□□□□ -0.02
CLPTM1-208ENST00000588274 SDK1Q7Z5N4 2213 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 DPYSL4O14531 572 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 RPP40O75818 363 aaKnown RBP14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 EGFP01133 1207 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 ARSAP15289 507 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 PAX3P23760 479 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 MATR3P43243 847 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 TUFMP49411 452 aaKnown RBP14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 GPR15P49685 360 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 NLRP12P59046 1061 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 GTF2BQ00403 316 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 GRIN1Q05586 938 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 RUNX3Q13761 415 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 TMEM132DQ14C87 1099 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 WSCD1Q658N2 575 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 ARL6IP4Q66PJ3 421 aaKnown RBP14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 CEP68Q76N32 757 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 CD302Q8IX05 232 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 GIPC2Q8TF65 315 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 ZC3H10Q96K80 434 aaKnown RBP14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 PKMYT1Q99640 499 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 SMOC1Q9H4F8 434 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 EBF3Q9H4W6 596 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 GKN1Q9NS71 199 aa14.92□□□□□ -0.02
CLPTM1-208ENST00000588274 AXIN1O15169 862 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 RNF40O75150 1001 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 PPP1R37O75864 691 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 AKAP3O75969 853 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 SCP2P22307 547 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 ADSSP30520 456 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 ACOT2P49753 483 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 TCEAL6Q6IPX3 200 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 ARMCX5Q6P1M9 558 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 CACNA2D4Q7Z3S7 1137 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 GPBP1Q86WP2 473 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 SPPL2BQ8TCT7 592 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 C2orf15Q8WU43 125 aaKnown RBP14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 DDX1Q92499 740 aaKnown RBP14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 TCEAL3Q969E4 200 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 ASB7Q9H672 318 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 PARVGQ9HBI0 331 aa14.91□□□□□ -0.02
CLPTM1-208ENST00000588274 CYB561D2O14569 222 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 TRAK2O60296 914 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 CHRM1P11229 460 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 MPLP40238 635 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 TAF6P49848 677 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 SMARCB1Q12824 385 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 PLK5Q496M5 336 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 AASDHQ4L235 1098 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 ZC2HC1CQ53FD0 456 aaPredicted RBP14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 STPG1Q5TH74 334 aa14.9□□□□□ -0.02
CLPTM1-208ENST00000588274 TXNDC8Q6A555 127 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms