RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GNL1P36915 607 aaPredicted RBP12.04□□□□□ -0.48
VMP1-207ENST00000588131 MAGEA1P43355 309 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 KRT83P78385 493 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 SPA17Q15506 151 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 CCDC122Q5T0U0 273 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 ACOT1Q86TX2 421 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 VPS36Q86VN1 386 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 UNC93AQ86WB7 457 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
VMP1-207ENST00000588131 ZNF677Q86XU0 584 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 BCL7CQ8WUZ0 217 aaPredicted RBP12.04□□□□□ -0.48
VMP1-207ENST00000588131 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 SUSD3Q96L08 255 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 PACSIN1Q9BY11 444 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 SNX25Q9H3E2 840 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 STXBP5LQ9Y2K9 1186 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 FAN1Q9Y2M0 1017 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 KIAA1671Q9BY89 1806 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 TMCO5BA8MYB1 307 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 NT5C1B-RDH14C9J2C7 533 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 ZSCAN12O43309 604 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 IPO7O95373 1038 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 ABL1P00519 1130 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 ALDH2P05091 517 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 CYP11A1P05108 521 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 PDGFRBP09619 1106 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 VDRP11473 427 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 PAX3P23760 479 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 ACAT1P24752 427 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 ARHGAP25P42331 645 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 VAV2P52735 878 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 BCAR1P56945 870 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 CCDC142Q17RM4 750 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 CLEC16AQ2KHT3 1053 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 KIAA0319Q5VV43 1072 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 ALKBH5Q6P6C2 394 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 CMTR2Q8IYT2 770 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 TMEM86AQ8N2M4 240 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 C12orf29Q8N999 325 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 HERVK_113Q902F9 699 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 HEXIM2Q96MH2 286 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 LBHD1Q9BQE6 289 aaPredicted RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 COLEC11Q9BWP8 271 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 DDX43Q9NXZ2 648 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 TRIM10Q9UDY6 481 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
VMP1-207ENST00000588131 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
VMP1-207ENST00000588131 O00370 1275 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 ATP2C2O75185 946 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 TADA2AO75478 443 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 MICAL2O94851 1124 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 GJB5O95377 273 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 CYP1A1P04798 512 aaPredicted RBP12.02□□□□□ -0.49
VMP1-207ENST00000588131 UNGP13051 313 aaPredicted RBP12.02□□□□□ -0.49
VMP1-207ENST00000588131 TYMPP19971 482 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 TKTP29401 623 aaKnown RBP12.02□□□□□ -0.49
VMP1-207ENST00000588131 PSMC1P62191 440 aaKnown RBP12.02□□□□□ -0.49
VMP1-207ENST00000588131 BTG3Q14201 252 aaPredicted RBP12.02□□□□□ -0.49
VMP1-207ENST00000588131 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 DENND1BQ6P3S1 775 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 KIAA1328Q86T90 577 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 CRYBG2Q8N1P7 616 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 GPR62Q9BZJ7 368 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 LACRTQ9GZZ8 138 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 ADAM28Q9UKQ2 775 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.49
VMP1-207ENST00000588131 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.02□□□□□ -0.49
VMP1-207ENST00000588131 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 CCP110O43303 1012 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 MED7O43513 233 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 ZNF500O60304 480 aaPredicted RBP12.01□□□□□ -0.49
VMP1-207ENST00000588131 RTN2O75298 545 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 CCDC130P13994 396 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 LHX1P48742 406 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 NOMO3P69849 1222 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
VMP1-207ENST00000588131 GOLGA7BQ2TAP0 167 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 PPP1R26Q5T8A7 1209 aaPredicted RBP12.01□□□□□ -0.49
VMP1-207ENST00000588131 NAA35Q5VZE5 725 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 OVOS1Q6IE37 1185 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 FUT10Q6P4F1 479 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 TRIM72Q6ZMU5 477 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 METTL23Q86XA0 190 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 WDTC1Q8N5D0 677 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 B3GALNT2Q8NCR0 500 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 C1orf131Q8NDD1 294 aaKnown RBP12.01□□□□□ -0.49
VMP1-207ENST00000588131 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 CPA5Q8WXQ8 436 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 B3GALT6Q96L58 329 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 YME1L1Q96TA2 773 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 SYT15Q9BQS2 421 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 ISCUQ9H1K1 167 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms