RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 ACVR2AP27037 513 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 JAG1P78504 1218 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 TCF15Q12870 199 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 DDX10Q13206 875 aaKnown RBP6.4□□□□□ -1.38
TUBD1-208ENST00000588009 TAF12Q16514 161 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 ARHGAP15Q53QZ3 475 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 ATXN7L2Q5T6C5 722 aaPredicted RBP6.4□□□□□ -1.38
TUBD1-208ENST00000588009 USP17L6PQ6QN14 398 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 KIAA0408Q6ZU52 694 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 PPP1R32Q7Z5V6 425 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 PPHLN1Q8NEY8 458 aaKnown RBP6.4□□□□□ -1.38
TUBD1-208ENST00000588009 DNERQ8NFT8 737 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 TBC1D15Q8TC07 691 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 STT3BQ8TCJ2 826 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 PPM1MQ96MI6 270 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 KLHL32Q96NJ5 620 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 NELL2Q99435 816 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 VKORC1Q9BQB6 163 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 IMPG2Q9BZV3 1241 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 HEYLQ9NQ87 328 aaPredicted RBP6.4□□□□□ -1.38
TUBD1-208ENST00000588009 XPNPEP3Q9NQH7 507 aa6.4□□□□□ -1.38
TUBD1-208ENST00000588009 LOC102723971A0A1B0GUV8 181 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 CDHR4A6H8M9 788 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 RRN3P2A6NIE6 340 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 RAB27BO00194 218 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 CYP2C9P11712 490 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 XRCC6P12956 609 aaKnown RBP eCLIP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 SLC6A2P23975 617 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 WNT3P56703 355 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 FOXD4Q12950 439 aaPredicted RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 MAPKAPK3Q16644 382 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 TIGD6Q17RP2 521 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 INTS11Q5TA45 600 aaKnown RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 LIN54Q6MZP7 749 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 FAM111BQ6SJ93 734 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 DOK3Q7L591 496 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 GPRIN1Q7Z2K8 1008 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 MOGAT3Q86VF5 341 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 ZNF761Q86XN6 746 aaPredicted RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 NAXEQ8NCW5 288 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 ZFP28Q8NHY6 868 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 TFAP2CQ92754 450 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 USP13Q92995 863 aaPredicted RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 SKA1Q96BD8 255 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 ZNF512Q96ME7 567 aaPredicted RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 KATNAL1Q9BW62 490 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 LSM14BQ9BX40 385 aaKnown RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 DHX36Q9H2U1 1008 aaKnown RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 C12orf65Q9H3J6 166 aaKnown RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 SWAP70Q9UH65 585 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 CNOT6Q9ULM6 557 aaKnown RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 ZMYND8Q9ULU4 1186 aaPredicted RBP6.39□□□□□ -1.39
TUBD1-208ENST00000588009 KCTD3Q9Y597 815 aa6.39□□□□□ -1.39
TUBD1-208ENST00000588009 MROH6A6NGR9 719 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 J3KRW8 73 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 B4GALT4O60513 344 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 MED14OSP0DP75 135 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 EGR1P18146 543 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 VIPR2P41587 438 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 CPT1AP50416 773 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 GEMIN4P57678 1058 aaKnown RBP6.38□□□□□ -1.39
TUBD1-208ENST00000588009 RAC3P60763 192 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 ARHGEF7Q14155 803 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 NPY5RQ15761 445 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 CSRP2Q16527 193 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 PLAG1Q6DJT9 500 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 FCRL6Q6DN72 434 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 SULT6B1Q6IMI4 303 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 CRTC1Q6UUV9 634 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 FAM83AQ86UY5 434 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 GAS2L3Q86XJ1 694 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 GPR135Q8IZ08 494 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 NME8Q8N427 588 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 PDPRQ8NCN5 879 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 OTUD7AQ8TE49 926 aaPredicted RBP6.38□□□□□ -1.39
TUBD1-208ENST00000588009 DACT3Q96B18 629 aaPredicted RBP6.38□□□□□ -1.39
TUBD1-208ENST00000588009 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 PPP1R9BQ96SB3 815 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 PRPF18Q99633 342 aaKnown RBP6.38□□□□□ -1.39
TUBD1-208ENST00000588009 MESP1Q9BRJ9 268 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 CNPPD1Q9BV87 410 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 CPEB1Q9BZB8 566 aaKnown RBP6.38□□□□□ -1.39
TUBD1-208ENST00000588009 PCDHAC1Q9H158 963 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 MRPS18AQ9NVS2 196 aaKnown RBP6.38□□□□□ -1.39
TUBD1-208ENST00000588009 ZSCAN32Q9NX65 697 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 HESX1Q9UBX0 185 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 CRYL1Q9Y2S2 319 aa6.38□□□□□ -1.39
TUBD1-208ENST00000588009 PRR5-ARHGAP8B1AHC4 643 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 EYA2O00167 538 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 CCP110O43303 1012 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 ASNA1O43681 348 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 CKBP12277 381 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 TPH1P17752 444 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 TNFAIP3P21580 790 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 MAN1A1P33908 653 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 POLE2P56282 527 aa6.37□□□□□ -1.39
TUBD1-208ENST00000588009 CNGB1Q14028 1251 aaPredicted RBP6.37□□□□□ -1.39
TUBD1-208ENST00000588009 PKN1Q16512 942 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms