RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 CITO14578 2027 aa6.94□□□□□ -1.3
SDF2-205ENST00000587629 FANCMQ8IYD8 2048 aa6.94□□□□□ -1.3
SDF2-205ENST00000587629 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 ANO9A1A5B4 782 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 MYBPHLA2RUH7 354 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 PRR5-ARHGAP8B1AHC4 643 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 PIGRP01833 764 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ADRB2P07550 413 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ATF6P18850 670 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CTHP32929 405 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 DDIT3P35638 169 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 LONP1P36776 959 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 PXNP49023 591 aaPredicted RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 TUFMP49411 452 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 GPR15P49685 360 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ZNF131P52739 623 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ARHGAP8P85298 464 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 GTF2BQ00403 316 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CEBPZQ03701 1054 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 LRRC32Q14392 662 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 VEPH1Q14D04 833 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 SF3A1Q15459 793 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 CCDC6Q16204 474 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ARHGAP29Q52LW3 1261 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 SDHAF4Q5VUM1 108 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 SCARA3Q6AZY7 606 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 TRIM68Q6AZZ1 485 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 LAIR1Q6GTX8 287 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 USP49Q70CQ1 688 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CEP68Q76N32 757 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 ITIH5Q86UX2 942 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 SFR1Q86XK3 245 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CD302Q8IX05 232 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 KCTD17Q8N5Z5 321 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CELF5Q8N6W0 485 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 MAB21L3Q8N8X9 362 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ZSWIM2Q8NEG5 633 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 BPIFB1Q8TDL5 484 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 POMGNT1Q8WZA1 660 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 LARP4BQ92615 738 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 BORCS6Q96GS4 357 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 EPSTI1Q96J88 318 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 FAM84AQ96KN4 292 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 GCNAQ96QF7 691 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 FIZ1Q96SL8 496 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 PI4K2AQ9BTU6 479 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 SLC46A2Q9BY10 475 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 PANK2Q9BZ23 570 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 TASP1Q9H6P5 420 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 C8orf33Q9H7E9 229 aaPredicted RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 GKN1Q9NS71 199 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 POLR3BQ9NW08 1133 aaPredicted RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 AGO2Q9UKV8 859 aaKnown RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 MAGED2Q9UNF1 606 aaPredicted RBP6.93□□□□□ -1.3
SDF2-205ENST00000587629 CCL26Q9Y258 94 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 ASB3Q9Y575 518 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CLIC4Q9Y696 253 aa6.93□□□□□ -1.3
SDF2-205ENST00000587629 CEP250Q9BV73 2442 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 PDCD11Q14690 1871 aaKnown RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 MYH11P35749 1972 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 VPS37CA5D8V6 355 aaPredicted RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 GOLGA8IPA6NC78 632 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 OTOL1A6NHN0 477 aaPredicted RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 GOLGA8JA6NMD2 632 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 KPNA7A9QM74 516 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 K7ESF4 209 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 AXIN1O15169 862 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 EXTL3O43909 919 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 GDF9O60383 454 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 FGF19O95750 216 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 CYP11A1P05108 521 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 RETP07949 1114 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 HAPLN1P10915 354 aaPredicted RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 SDHBP21912 280 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 ACAT1P24752 427 aaKnown RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 CDC25CP30307 473 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 ADSSP30520 456 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 TAF6P49848 677 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 WNT7BP56706 349 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 TFAMQ00059 246 aaKnown RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 KCNA1Q09470 495 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 DDR2Q16832 855 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 ITPRIPL2Q3MIP1 535 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 DGKKQ5KSL6 1271 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 TXNDC8Q6A555 127 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 SLFN12LQ6IEE8 588 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 PKN3Q6P5Z2 889 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 CRELD2Q6UXH1 353 aaPredicted RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 ZNF720Q7Z2F6 126 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 LONP2Q86WA8 852 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 EFCAB13Q8IY85 973 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 CMTM8Q8IZV2 173 aa6.92□□□□□ -1.3
SDF2-205ENST00000587629 KRI1Q8N9T8 703 aaKnown RBP6.92□□□□□ -1.3
SDF2-205ENST00000587629 SAAL1Q96ER3 474 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms