RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 NKD2Q969F2 451 aaPredicted RBP17.33■□□□□ 0.36
RANBP3-209ENST00000587411 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 PPP1R12CQ9BZL4 782 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
RANBP3-209ENST00000587411 TAS2R1Q9NYW7 299 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 IP6K2Q9UHH9 426 aa17.33■□□□□ 0.36
RANBP3-209ENST00000587411 ADAMTSL1Q8N6G6 1762 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 WDR91A4D1P6 747 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 F8W8V4 182 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 SERPINB2P05120 415 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 ITGAVP06756 1048 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 RAP1GDS1P52306 607 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 CACNB3P54284 484 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 PDCD7Q8N8D1 485 aaKnown RBP17.32■□□□□ 0.36
RANBP3-209ENST00000587411 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 TMEM120AQ9BXJ8 343 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
RANBP3-209ENST00000587411 ACSS3Q9H6R3 686 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 TLR3O15455 904 aaKnown RBP17.32■□□□□ 0.36
RANBP3-209ENST00000587411 GH2P01242 217 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 RARBP10826 455 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 BRD2P25440 801 aaKnown RBP17.32■□□□□ 0.36
RANBP3-209ENST00000587411 SERPINB3P29508 390 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 PTPN7P35236 360 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 POLE2P56282 527 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 OASLQ15646 514 aaKnown RBP17.32■□□□□ 0.36
RANBP3-209ENST00000587411 LRRC38Q5VT99 294 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 KAZNQ674X7 775 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 RINLQ6ZS11 566 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 NLRX1Q86UT6 975 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 PHF13Q86YI8 300 aaPredicted RBP17.32■□□□□ 0.36
RANBP3-209ENST00000587411 MZB1Q8WU39 189 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 PAFAH2Q99487 392 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
RANBP3-209ENST00000587411 CLUHO75153 1309 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 MAGEC1O60732 1142 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 KRT1P04264 644 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 KRT10P13645 584 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 ETS1P14921 441 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 GLRA2P23416 452 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 ARL4CP56559 192 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 NOP14P78316 857 aaKnown RBP17.31■□□□□ 0.36
RANBP3-209ENST00000587411 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
RANBP3-209ENST00000587411 CUL3Q13618 768 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 FOXB2Q5VYV0 432 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 FEZF2Q8TBJ5 459 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 PYROXD1Q8WU10 500 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 WDR60Q8WVS4 1066 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 PARVAQ9NVD7 372 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 POLIQ9UNA4 740 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 TSHRP16473 764 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 ATF7P17544 494 aaPredicted RBP17.31■□□□□ 0.36
RANBP3-209ENST00000587411 YWHABP31946 246 aaKnown RBP17.31■□□□□ 0.36
RANBP3-209ENST00000587411 NOMO3P69849 1222 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 FAM98CQ17RN3 349 aaKnown RBP17.31■□□□□ 0.36
RANBP3-209ENST00000587411 NIPA1Q7RTP0 329 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 PHC3Q8NDX5 983 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 TMEM161BQ8NDZ6 487 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 DTX3LQ8TDB6 740 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 GORASP1Q9BQQ3 440 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 PI4K2AQ9BTU6 479 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 KCNK13Q9HB14 408 aa17.31■□□□□ 0.36
RANBP3-209ENST00000587411 METTL5Q9NRN9 209 aaKnown RBP17.31■□□□□ 0.36
RANBP3-209ENST00000587411 DSG3P32926 999 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 PGM1P36871 562 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 ECE1P42892 770 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 TFDP1Q14186 410 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 DLGAP5Q15398 846 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 WDR44Q5JSH3 913 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 ZFYVE27Q5T4F4 411 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 MFSD7Q6UXD7 560 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 ANKMY2Q8IV38 441 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 PTPRN2Q92932 1015 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 KRT82Q9NSB4 513 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
RANBP3-209ENST00000587411 PI4K2BG5E9Z4 385 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 DLDP09622 509 aaKnown RBP17.3■□□□□ 0.36
RANBP3-209ENST00000587411 DHRS4L1P0CG22 281 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 ITGB5P18084 799 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 THOC5Q13769 683 aaKnown RBP17.3■□□□□ 0.36
RANBP3-209ENST00000587411 PRKD1Q15139 912 aaPredicted RBP17.3■□□□□ 0.36
RANBP3-209ENST00000587411 SPOCD1Q6ZMY3 1216 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 LRRC6Q86X45 466 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 ABRAQ8N0Z2 381 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 ADAM33Q9BZ11 813 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 GPRC5CQ9NQ84 441 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 FBXO6Q9NRD1 293 aaPredicted RBP17.3■□□□□ 0.36
RANBP3-209ENST00000587411 KCNH7Q9NS40 1196 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 SLC17A7Q9P2U7 560 aa17.3■□□□□ 0.36
RANBP3-209ENST00000587411 DENND3A2RUS2 1198 aa17.29■□□□□ 0.36
RANBP3-209ENST00000587411 RNF8O76064 485 aa17.29■□□□□ 0.36
RANBP3-209ENST00000587411 DOK7Q18PE1 504 aa17.29■□□□□ 0.36
RANBP3-209ENST00000587411 FAM102BQ5T8I3 360 aa17.29■□□□□ 0.36
RANBP3-209ENST00000587411 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms