RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TMEM143Q96AN5 459 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 RSRC1Q96IZ7 334 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 CGRRF1Q99675 332 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 TEX13BQ9BXU2 312 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 CYP39A1Q9NYL5 469 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 NOP53Q9NZM5 478 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 SENP1Q9P0U3 644 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 PHTF1Q9UMS5 762 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 SPDYE16A6NNV3 312 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 K7ERI5 159 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 ALOX15BO15296 676 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 LDHAP00338 332 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 KRT15P19012 456 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 YARSP54577 528 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 ZNF252P-AS1Q0IIN9 211 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 PKN2Q16513 984 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 HP1BP3Q5SSJ5 553 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 SPOCD1Q6ZMY3 1216 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 OR5B17Q8NGF7 314 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 CDHR1Q96JP9 859 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 SMC6Q96SB8 1091 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 MSTO1Q9BUK6 570 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 KIF9Q9HAQ2 790 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 ETNK1Q9HBU6 452 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 TXLNGQ9NUQ3 528 aa17.79■□□□□ 0.44
PRKCSH-205ENST00000587327 CNTNAP2Q9UHC6 1331 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 A0A0B4J269 797 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 F8VP50 259 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 ZNF132P52740 706 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 MOGSQ13724 837 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 NCOA4Q13772 614 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 SETDB1Q15047 1291 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 OASLQ15646 514 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 PDK4Q16654 411 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 WDR72Q3MJ13 1102 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 RNASEH2BQ5TBB1 312 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 CCDC125Q86Z20 511 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 SPOCK2Q92563 424 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 PORCNQ9H237 461 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 ACAD9Q9H845 621 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 VPS37BQ9H9H4 285 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 AFG3L2Q9Y4W6 797 aa17.78■□□□□ 0.44
PRKCSH-205ENST00000587327 TCRBV5S1A1TA0A578 114 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 CALB1P05937 261 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 PTPN7P35236 360 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 RPA3P35244 121 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 VCPP55072 806 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 ATP11AP98196 1134 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 RASA2Q15283 850 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 TFDP3Q5H9I0 405 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 ZBED8Q8IZ13 594 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 ASAP3Q8TDY4 903 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 NKD2Q969F2 451 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 THOC1Q96FV9 657 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 MCEEQ96PE7 176 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 TARS2Q9BW92 718 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 MYLK2Q9H1R3 596 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 PPCSQ9HAB8 311 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 SLCO1B3Q9NPD5 702 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 FBXO40Q9UH90 709 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 GRID1Q9ULK0 1009 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 PPP2R3BQ9Y5P8 575 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.44
PRKCSH-205ENST00000587327 hCG_1818297A0A087WSY0 165 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 ATP5HO75947 161 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 ITGAVP06756 1048 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 GLRA2P23416 452 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 NAMPTP43490 491 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 CLNS1AP54105 237 aaKnown RBP17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 CENPUQ71F23 418 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 C4orf33Q8N1A6 199 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.77■□□□□ 0.435e-12■■□□□ 12.7
PRKCSH-205ENST00000587327 DEPTORQ8TB45 409 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 LRRC37BQ96QE4 947 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 RAB3IPQ96QF0 476 aaPredicted RBP17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 SLC24A2Q9UI40 661 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 SHOC2Q9UQ13 582 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 CHKBQ9Y259 395 aa17.77■□□□□ 0.43
PRKCSH-205ENST00000587327 ADGRA2Q96PE1 1338 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 LRRIQ4A6NIV6 560 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 SPATA31C2B4DYI2 1134 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 LSM8O95777 96 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 SUPT20HL2P0C7V6 817 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 ATP4AP20648 1035 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 OGDHQ02218 1023 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 SUPT20HL1Q3ZLR7 823 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 SCARA3Q6AZY7 606 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 TXNRD3NBQ6F5E7 133 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 VSIG1Q86XK7 387 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 UBR7Q8N806 425 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 MIEF2Q96C03 454 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 ERP27Q96DN0 273 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 PTPRFP10586 1907 aa17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 DICER1Q9UPY3 1922 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-205ENST00000587327 PAPPA2Q9BXP8 1791 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms