RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FKBP3Q00688 224 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 DMWDQ09019 674 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 STK4Q13043 487 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 SRSF5Q13243 272 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 PRPF4BQ13523 1007 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 NR1I3Q14994 352 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 KRT31Q15323 416 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 ECM1Q16610 540 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 EDRF1Q3B7T1 1238 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 FKBP15Q5T1M5 1219 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 MTSS1LQ765P7 747 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 KCNK18Q7Z418 384 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 HACE1Q8IYU2 909 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 GOLGA5Q8TBA6 731 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 KIAA1524Q8TCG1 905 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 LRRC15Q8TF66 581 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 SHDQ96IW2 340 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 DRC1Q96MC2 740 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 ZSWIM3Q96MP5 696 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 NUP58Q9BVL2 599 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 SLC4A5Q9BY07 1137 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 BHMT2Q9H2M3 363 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 FZD8Q9H461 694 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 PARVGQ9HBI0 331 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 SAMSN1Q9NSI8 373 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 ANKEF1Q9NU02 776 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 USP18Q9UMW8 372 aa8.46□□□□□ -1.06
VMP1-204ENST00000587259 MRPS23Q9Y3D9 190 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.06
VMP1-204ENST00000587259 GOLGA6L9A6NEM1 432 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 LGALS16A8MUM7 142 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 CALUO43852 315 aaPredicted RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 XYLBO75191 536 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 SEC24AO95486 1093 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 FGFR3P22607 806 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 FCARP24071 287 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 COPB1P53618 953 aaKnown RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 CREMQ03060 361 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 POU5F1BQ06416 359 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 SPEM2Q0P670 501 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 RAB33AQ14088 237 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 BMT2Q1RMZ1 405 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 FAM78AQ5JUQ0 283 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 ZBTB41Q5SVQ8 909 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 CDCA2Q69YH5 1023 aaPredicted RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 ZBTB44Q8NCP5 570 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 TTC8Q8TAM2 541 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 ATRIPQ8WXE1 791 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 CORO1BQ9BR76 489 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 REEP2Q9BRK0 252 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 SRRTQ9BXP5 876 aaKnown RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 NFKBIZQ9BYH8 718 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 CCDC113Q9H0I3 377 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 C17orf75Q9HAS0 396 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 SLC39A2Q9NP94 309 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 KCND1Q9NSA2 647 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 SPTLC3Q9NUV7 552 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 PRMT7Q9NVM4 692 aaPredicted RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 C2orf42Q9NWW7 574 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 LARSQ9P2J5 1176 aaKnown RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 CGNQ9P2M7 1197 aaKnown RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 MTRRQ9UBK8 725 aa8.45□□□□□ -1.06
VMP1-204ENST00000587259 RALYQ9UKM9 306 aaKnown RBP8.45□□□□□ -1.06
VMP1-204ENST00000587259 ACACBO00763 2458 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 WDR27A2RRH5 827 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 H0YCG3 227 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 PDXKO00764 312 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MEFVO15553 781 aaPredicted RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ARHGAP6O43182 974 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 GDF9O60383 454 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 STX10O60499 249 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 LILRB5O75023 590 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 SKILP12757 684 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 HOXA9P31269 272 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 VIPR2P41587 438 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MTIF2P46199 727 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 SOX9P48436 509 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZNF131P52739 623 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MARSP56192 900 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 SNRPFP62306 86 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ROR1Q01973 937 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 PRKCQQ04759 706 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 NOLC1Q14978 699 aaKnown RBP eCLIP8.44□□□□□ -1.06
VMP1-204ENST00000587259 PCBP1Q15365 356 aaKnown RBP eCLIP8.44□□□□□ -1.06
VMP1-204ENST00000587259 NFIL3Q16649 462 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 MAN2A1Q16706 1144 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 UPP1Q16831 310 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZNF528Q3MIS6 628 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 SEZ6Q53EL9 994 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 WDR44Q5JSH3 913 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 RINT1Q6NUQ1 792 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 PADI6Q6TGC4 694 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZNF852Q6ZMS4 543 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 HS2ST1Q7LGA3 356 aa8.44□□□□□ -1.06
VMP1-204ENST00000587259 APTXQ7Z2E3 356 aaKnown RBP8.44□□□□□ -1.06
VMP1-204ENST00000587259 ZBTB8OSQ8IWT0 167 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms