RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 GPR17Q13304 367 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 ANO6Q4KMQ2 910 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 WDR44Q5JSH3 913 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 LIMS2Q7Z4I7 341 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 LRRTM3Q86VH5 581 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 FAM114A1Q8IWE2 563 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 ENOX1Q8TC92 643 aaKnown RBP22.96■■□□□ 1.27
RETREG3-204ENST00000586796 ACBD6Q9BR61 282 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 SDCBP2Q9H190 292 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 ADAM7Q9H2U9 754 aa22.96■■□□□ 1.27
RETREG3-204ENST00000586796 APOBEC3GQ9HC16 384 aaKnown RBP22.96■■□□□ 1.27
RETREG3-204ENST00000586796 SAMSN1Q9NSI8 373 aaKnown RBP22.96■■□□□ 1.27
RETREG3-204ENST00000586796 AFF4Q9UHB7 1163 aaKnown RBP22.96■■□□□ 1.27
RETREG3-204ENST00000586796 USP15Q9Y4E8 981 aaPredicted RBP22.96■■□□□ 1.27
RETREG3-204ENST00000586796 N4BP1O75113 896 aaKnown RBP22.95■■□□□ 1.26
RETREG3-204ENST00000586796 TACC1O75410 805 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 IL9P15248 144 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 PSMC1P62191 440 aaKnown RBP22.95■■□□□ 1.26
RETREG3-204ENST00000586796 ITIH3Q06033 890 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 PUS10Q3MIT2 529 aaKnown RBP22.95■■□□□ 1.26
RETREG3-204ENST00000586796 CCDC149Q6ZUS6 474 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 DCP1BQ8IZD4 617 aaKnown RBP22.95■■□□□ 1.26
RETREG3-204ENST00000586796 ATAD1Q8NBU5 361 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 SPATA18Q8TC71 538 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 PIDD1Q9HB75 910 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 SLC27A5Q9Y2P5 690 aa22.95■■□□□ 1.26
RETREG3-204ENST00000586796 MTMR11A4FU01 709 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 CCL16O15467 120 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 ATP2C2O75185 946 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 PCSK1P29120 753 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 LRMPQ12912 555 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 DUSP4Q13115 394 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 INTS6LQ5JSJ4 861 aaKnown RBP22.94■■□□□ 1.26
RETREG3-204ENST00000586796 SMG7Q92540 1137 aaKnown RBP22.94■■□□□ 1.26
RETREG3-204ENST00000586796 TATDN2Q93075 761 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 SYT15Q9BQS2 421 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 TMLHEQ9NVH6 421 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 ZDHHC7Q9NXF8 308 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 GTF3C4Q9UKN8 822 aa22.94■■□□□ 1.26
RETREG3-204ENST00000586796 A8MXQ7 604 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 VNN2O95498 520 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 ASPAP45381 313 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 CETN1Q12798 172 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 CCDC142Q17RM4 750 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 UVSSAQ2YD98 709 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 ATAT1Q5SQI0 421 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 GPR149Q86SP6 731 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 TCEAL8Q8IYN2 117 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 NIF3L1Q9GZT8 377 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 CRISPLD1Q9H336 500 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 ABI2Q9NYB9 513 aaPredicted RBP22.93■■□□□ 1.26
RETREG3-204ENST00000586796 CDH9Q9ULB4 789 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 FAM50BQ9Y247 325 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 COQ4Q9Y3A0 265 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 NME7Q9Y5B8 376 aa22.93■■□□□ 1.26
RETREG3-204ENST00000586796 MYBPHLA2RUH7 354 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 KCNJ18B7U540 433 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 LRG1P02750 347 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 FAM163BP0C2L3 166 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 PRKCSHP14314 528 aaPredicted RBP22.92■■□□□ 1.26
RETREG3-204ENST00000586796 CD58P19256 250 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 KCNJ12Q14500 433 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 TTC9BQ8N6N2 239 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 CMASQ8NFW8 434 aaPredicted RBP22.92■■□□□ 1.26
RETREG3-204ENST00000586796 ZNF707Q96C28 371 aaPredicted RBP22.92■■□□□ 1.26
RETREG3-204ENST00000586796 RIPOR3Q96MK2 946 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 LPIN3Q9BQK8 851 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 PRKD2Q9BZL6 878 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 NAT10Q9H0A0 1025 aaKnown RBP22.92■■□□□ 1.26
RETREG3-204ENST00000586796 DPEP3Q9H4B8 488 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 FANCLQ9NW38 375 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 INSL5Q9Y5Q6 135 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 XIRP2A4UGR9 3374 aa22.92■■□□□ 1.26
RETREG3-204ENST00000586796 SOAT2O75908 522 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 BMP1P13497 986 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 MYL5Q02045 173 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 TWF1Q12792 350 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 ORC1Q13415 861 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 CBX2Q14781 532 aaPredicted RBP22.91■■□□□ 1.26
RETREG3-204ENST00000586796 ZSCAN23Q3MJ62 389 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 MGAT5BQ3V5L5 792 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 TJAP1Q5JTD0 557 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 AOPEPQ8N6M6 819 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 SUSD6Q92537 303 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 SEPT5Q99719 369 aaPredicted RBP22.91■■□□□ 1.26
RETREG3-204ENST00000586796 CRTAC1Q9NQ79 661 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 MAFFQ9ULX9 164 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 PCDHB5Q9Y5E4 795 aa22.91■■□□□ 1.26
RETREG3-204ENST00000586796 PES1O00541 588 aaKnown RBP22.9■■□□□ 1.26
RETREG3-204ENST00000586796 P4HA2O15460 535 aa22.9■■□□□ 1.26
RETREG3-204ENST00000586796 HNRNPA1P09651 372 aaKnown RBP eCLIP22.9■■□□□ 1.26
RETREG3-204ENST00000586796 MTHFRP42898 656 aa22.9■■□□□ 1.26
RETREG3-204ENST00000586796 SMAD2Q15796 467 aaKnown RBP22.9■■□□□ 1.26
RETREG3-204ENST00000586796 NFE2Q16621 373 aaPredicted RBP22.9■■□□□ 1.26
RETREG3-204ENST00000586796 MAN2A1Q16706 1144 aa22.9■■□□□ 1.26
RETREG3-204ENST00000586796 MDH1BQ5I0G3 518 aa22.9■■□□□ 1.26
RETREG3-204ENST00000586796 SPATA2LQ8IUW3 424 aaPredicted RBP22.9■■□□□ 1.26
RETREG3-204ENST00000586796 TUBGCP2Q9BSJ2 902 aa22.9■■□□□ 1.26
RETREG3-204ENST00000586796 FUCA2Q9BTY2 467 aa22.9■■□□□ 1.26
RETREG3-204ENST00000586796 BCO2Q9BYV7 579 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms