RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 SP9P0CG40 484 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 HAPLN1P10915 354 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-203ENST00000586495 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
TRIM47-203ENST00000586495 CDC25CP30307 473 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 ME1P48163 572 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 BFSP1Q12934 665 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 NFE2Q16621 373 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-203ENST00000586495 FOXD4L6Q3SYB3 417 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-203ENST00000586495 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 FOXD4L3Q6VB84 417 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-203ENST00000586495 GAREM2Q75VX8 874 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 SPATA18Q8TC71 538 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 CLDN23Q96B33 292 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 ACBD6Q9BR61 282 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-203ENST00000586495 PCDHB5Q9Y5E4 795 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 TSC2P49815 1807 aa18.26■□□□□ 0.51
TRIM47-203ENST00000586495 POLR2DO15514 142 aaKnown RBP18.25■□□□□ 0.51
TRIM47-203ENST00000586495 TNNC2P02585 160 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 RPS9P46781 194 aaKnown RBP18.25■□□□□ 0.51
TRIM47-203ENST00000586495 MYL7Q01449 175 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 MYO1EQ12965 1108 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 GPR158Q5T848 1215 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 UNC13DQ70J99 1090 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 ARID3BQ8IVW6 561 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-203ENST00000586495 PDCL2Q8N4E4 241 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 GLIS3Q8NEA6 775 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 ZNF507Q8TCN5 953 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 HPS3Q969F9 1004 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 LPIN3Q9BQK8 851 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 MTMR12Q9C0I1 747 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 INTS13Q9NVM9 706 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 GDAP2Q9NXN4 497 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 OBP2AQ9NY56 170 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 HSPBP1Q9NZL4 362 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 ZMYM5Q9UJ78 669 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 FBXO4Q9UKT5 387 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 PCDHA7Q9UN72 937 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 L1RE1Q9UN81 338 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 SNX9Q9Y5X1 595 aa18.25■□□□□ 0.51
TRIM47-203ENST00000586495 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-203ENST00000586495 CHADO15335 359 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 LMNAP02545 664 aaKnown RBP18.24■□□□□ 0.51
TRIM47-203ENST00000586495 ATF6P18850 670 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 LHX1P48742 406 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 SNRPFP62306 86 aaKnown RBP18.24■□□□□ 0.51
TRIM47-203ENST00000586495 DUOXA2Q1HG44 320 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 ZNF528Q3MIS6 628 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 C1orf228Q6PIY5 440 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 EPM2AIP1Q7L775 607 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-203ENST00000586495 DPH6Q7L8W6 267 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 TOP6BLQ8N6T0 577 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 CXorf38Q8TB03 319 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 CSGALNACT1Q8TDX6 532 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 LEO1Q8WVC0 666 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-203ENST00000586495 FAM3CQ92520 227 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 TASP1Q9H6P5 420 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 DDX43Q9NXZ2 648 aaKnown RBP18.24■□□□□ 0.51
TRIM47-203ENST00000586495 PIAS3Q9Y6X2 628 aa18.24■□□□□ 0.51
TRIM47-203ENST00000586495 UBE4BO95155 1302 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 ZFHX2Q9C0A1 2572 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-203ENST00000586495 PVALEFA0A1B0GWK0 134 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 PRPF40AO75400 957 aaKnown RBP18.23■□□□□ 0.51
TRIM47-203ENST00000586495 PCSK1P29120 753 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 WEE1P30291 646 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 CDR1P51861 262 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 MLLT6P55198 1093 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-203ENST00000586495 FCHO2Q0JRZ9 810 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 INTS6LQ5JSJ4 861 aaKnown RBP18.23■□□□□ 0.51
TRIM47-203ENST00000586495 STXBP5Q5T5C0 1151 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 CBWD2Q8IUF1 395 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 ADSSL1Q8N142 457 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 MSANTD3Q96H12 275 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 MKNK1Q9BUB5 465 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 SIX4Q9UIU6 781 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
TRIM47-203ENST00000586495 R4GN57 208 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 CACNA1IQ9P0X4 2223 aa18.23■□□□□ 0.51
TRIM47-203ENST00000586495 SHISA7A6NL88 538 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 CSH1P0DML2 217 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 CSH2P0DML3 217 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 HOXD13P35453 343 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 RPL10AP62906 217 aaKnown RBP18.22■□□□□ 0.51
TRIM47-203ENST00000586495 CYP4F8P98187 520 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 ARHGAP29Q52LW3 1261 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 RESP18Q5W5W9 173 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 LMBRD2Q68DH5 695 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-203ENST00000586495 HS2ST1Q7LGA3 356 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 WDR49Q8IV35 697 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 CEP57L1Q8IYX8 460 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 ADGRF2Q8IZF7 708 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 MAML2Q8IZL2 1156 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-203ENST00000586495 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 FNBP1Q96RU3 617 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 IER2Q9BTL4 223 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 PI4K2AQ9BTU6 479 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 C8orf33Q9H7E9 229 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-203ENST00000586495 IL21Q9HBE4 155 aa18.22■□□□□ 0.51
TRIM47-203ENST00000586495 ABCB6Q9NP58 842 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms