RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 AXIN1O15169 862 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 XPOTO43592 962 aaKnown RBP12.57□□□□□ -0.4
LIG3-207ENST00000586119 CYP11A1P05108 521 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 RETP07949 1114 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 UBA7P41226 1012 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 MLLT6P55198 1093 aaPredicted RBP12.57□□□□□ -0.4
LIG3-207ENST00000586119 KCNA1Q09470 495 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 CCINQ13939 588 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 ARHGAP29Q52LW3 1261 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 ADALQ6DHV7 355 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 LONP2Q86WA8 852 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 RALGPS2Q86X27 583 aaPredicted RBP12.57□□□□□ -0.4
LIG3-207ENST00000586119 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
LIG3-207ENST00000586119 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 HPS4Q9NQG7 708 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 DPP3Q9NY33 737 aa12.57□□□□□ -0.4
LIG3-207ENST00000586119 HCRTO43612 131 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 F11P03951 625 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 KRT18P05783 430 aaKnown RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 HAPLN1P10915 354 aaPredicted RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 ADSSP30520 456 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 LRRC32Q14392 662 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 PPP2R5DQ14738 602 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 SF3A1Q15459 793 aaKnown RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 KYAT1Q16773 422 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 DGKKQ5KSL6 1271 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 TXNDC8Q6A555 127 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 PRR23CQ6ZRP0 262 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 CD302Q8IX05 232 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 MAB21L3Q8N8X9 362 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 FAM83CQ9BQN1 747 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 EBF3Q9H4W6 596 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 RXFP3Q9NSD7 469 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 TBC1D7Q9P0N9 293 aa12.56□□□□□ -0.4
LIG3-207ENST00000586119 AGO2Q9UKV8 859 aaKnown RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 CNOT1A5YKK6 2376 aaKnown RBP12.56□□□□□ -0.4
LIG3-207ENST00000586119 GREB1Q4ZG55 1949 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 ANAPC1Q9H1A4 1944 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 ANTXRLA6NF34 631 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 SLC30A4O14863 429 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 PAPSS2O95340 614 aaPredicted RBP12.55□□□□□ -0.4
LIG3-207ENST00000586119 ARSAP15289 507 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 SDHBP21912 280 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 TUFMP49411 452 aaKnown RBP12.55□□□□□ -0.4
LIG3-207ENST00000586119 MCM2P49736 904 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 TAF6P49848 677 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 SF3A2Q15428 464 aaKnown RBP12.55□□□□□ -0.4
LIG3-207ENST00000586119 CSRP2Q16527 193 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 ARHGAP15Q53QZ3 475 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
LIG3-207ENST00000586119 ITIH5Q86UX2 942 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 SFR1Q86XK3 245 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 USP13Q92995 863 aaPredicted RBP12.55□□□□□ -0.4
LIG3-207ENST00000586119 AK8Q96MA6 479 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 SMOC1Q9H4F8 434 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 ASB7Q9H672 318 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 OBP2AQ9NY56 170 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 MAGED2Q9UNF1 606 aaPredicted RBP12.55□□□□□ -0.4
LIG3-207ENST00000586119 DERAQ9Y315 318 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 STYXL1Q9Y6J8 313 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
LIG3-207ENST00000586119 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 EGFP01133 1207 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 ADRB1P08588 477 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 KCNA4P22459 653 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
LIG3-207ENST00000586119 WEE1P30291 646 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 CDC25CP30307 473 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 DDIT3P35638 169 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 GALK1P51570 392 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 NLRP12P59046 1061 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 RUNX3Q13761 415 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 VEPH1Q14D04 833 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 DDR2Q16832 855 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 ITPRIPL2Q3MIP1 535 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 PPM1JQ5JR12 505 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
LIG3-207ENST00000586119 CEP68Q76N32 757 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 WDR5BQ86VZ2 330 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 OSTM1Q86WC4 334 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 CMTM8Q8IZV2 173 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 THEM5Q8N1Q8 247 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 SAAL1Q96ER3 474 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 MSANTD3Q96H12 275 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
LIG3-207ENST00000586119 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms