RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
SDF2-202ENST00000585428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.64■□□□□ 0.09
SDF2-202ENST00000585428 F11P03951 625 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 ADRB1P08588 477 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 HMGA1P17096 107 aaKnown RBP15.64■□□□□ 0.09
SDF2-202ENST00000585428 GJB2P29033 226 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 CDR1P51861 262 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 CYP4F8P98187 520 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 GRIN1Q05586 938 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 C8orf34Q49A92 452 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 WSCD1Q658N2 575 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 HEATR6Q6AI08 1181 aaKnown RBP15.64■□□□□ 0.09
SDF2-202ENST00000585428 PRR23CQ6ZRP0 262 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 ZNF720Q7Z2F6 126 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 METTL23Q86XA0 190 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 THEM5Q8N1Q8 247 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 FAM160A2Q8N612 972 aaPredicted RBP15.64■□□□□ 0.09
SDF2-202ENST00000585428 SPPL2BQ8TCT7 592 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 RAD54LQ92698 747 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 SEPT5Q99719 369 aaPredicted RBP15.64■□□□□ 0.09
SDF2-202ENST00000585428 STRA6Q9BX79 667 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 ZMYM5Q9UJ78 669 aa15.64■□□□□ 0.09
SDF2-202ENST00000585428 NCOR2Q9Y618 2525 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 OTOL1A6NHN0 477 aaPredicted RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 SOBPA7XYQ1 873 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 KPNA7A9QM74 516 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 TISP43B9A030 160 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 H3BQV1 296 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 TRDMT1O14717 391 aaKnown RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 EXTL3O43909 919 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 GDF9O60383 454 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 FOXD2O60548 495 aaPredicted RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 PLCG1P19174 1290 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 ADSSP30520 456 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 LONP1P36776 959 aaKnown RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 MCM2P49736 904 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 TAF6P49848 677 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 VEPH1Q14D04 833 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 KARSQ15046 597 aaKnown RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 PTPAQ15257 358 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 RABEP1Q15276 862 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 TMEM196Q5HYL7 178 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 ADALQ6DHV7 355 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 FAM200AQ8TCP9 573 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 CHFRQ96EP1 664 aa15.63■□□□□ 0.09
SDF2-202ENST00000585428 PYM1Q9BRP8 204 aaKnown RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 SMG9Q9H0W8 520 aaKnown RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 AGO2Q9UKV8 859 aaKnown RBP15.63■□□□□ 0.09
SDF2-202ENST00000585428 TICRRQ7Z2Z1 1910 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 CCDC163A0A0D9SF12 145 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 NLRP12P59046 1061 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 RUNX3Q13761 415 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 PKN3Q6P5Z2 889 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.62■□□□□ 0.09
SDF2-202ENST00000585428 USP13Q92995 863 aaPredicted RBP15.62■□□□□ 0.09
SDF2-202ENST00000585428 IKZF4Q9H2S9 585 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 ZHX3Q9H4I2 956 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 HPS4Q9NQG7 708 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 CCL26Q9Y258 94 aa15.62■□□□□ 0.09
SDF2-202ENST00000585428 PDCD11Q14690 1871 aaKnown RBP15.62■□□□□ 0.09
SDF2-202ENST00000585428 TM4SF5O14894 197 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 KRT37O76014 449 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 CD2BP2O95400 341 aaKnown RBP15.61■□□□□ 0.09
SDF2-202ENST00000585428 KRT18P05783 430 aaKnown RBP15.61■□□□□ 0.09
SDF2-202ENST00000585428 RAP1GAPP47736 663 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 TAF12Q16514 161 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 PPM1JQ5JR12 505 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 FSTL4Q6MZW2 842 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 NT5DC4Q86YG4 428 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 EFCAB13Q8IY85 973 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 DCP1BQ8IZD4 617 aaKnown RBP15.61■□□□□ 0.09
SDF2-202ENST00000585428 MAB21L3Q8N8X9 362 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 LARP4BQ92615 738 aaKnown RBP15.61■□□□□ 0.09
SDF2-202ENST00000585428 LOXL4Q96JB6 756 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
SDF2-202ENST00000585428 TDP1Q9NUW8 608 aa15.61■□□□□ 0.09
SDF2-202ENST00000585428 AXIN1O15169 862 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 ATG13O75143 517 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 TBCAO75347 108 aaKnown RBP15.6■□□□□ 0.09
SDF2-202ENST00000585428 PPP1R37O75864 691 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 BMP15O95972 392 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 ZNF806P0C7X5 589 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 DDX6P26196 483 aaKnown RBP eCLIP15.6■□□□□ 0.09
SDF2-202ENST00000585428 GALK1P51570 392 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 GRSF1Q12849 480 aaKnown RBP eCLIP15.6■□□□□ 0.09
SDF2-202ENST00000585428 POSTNQ15063 836 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 LARP1BQ659C4 914 aaKnown RBP15.6■□□□□ 0.09
SDF2-202ENST00000585428 TXNDC8Q6A555 127 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 SCARA3Q6AZY7 606 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 CEP68Q76N32 757 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 MON1AQ86VX9 555 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 KRI1Q8N9T8 703 aaKnown RBP15.6■□□□□ 0.09
SDF2-202ENST00000585428 CXorf38Q8TB03 319 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 RIN3Q8TB24 985 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 GAB3Q8WWW8 586 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 GCNAQ96QF7 691 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 EBF3Q9H4W6 596 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 ABI2Q9NYB9 513 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms