RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 KIF6Q6ZMV9 814 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 GADL1Q6ZQY3 521 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PPP1R42Q7Z4L9 355 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MAATS1Q7Z4T9 603 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 RSPH3Q86UC2 560 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TMPRSS6Q8IU80 811 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SVIPQ8NHG7 77 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 LENG9Q96B70 501 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 EVI5LQ96CN4 794 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 UHRF1Q96T88 793 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ANO3Q9BYT9 981 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 GNL3LQ9NVN8 582 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 USP36Q9P275 1121 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TAGLN3Q9UI15 199 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 OGDHLQ9ULD0 1010 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 HEG1Q9ULI3 1381 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 GAGE12BA1L429 117 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 GAGE12HA6NDE8 117 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MTSS1O43312 755 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TRIM27P14373 513 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ALDH1B1P30837 517 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 HALP42357 657 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TECP42680 631 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 WASP42768 502 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MTHFSP49914 203 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 KCNQ1P51787 676 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 FKBP1AP62942 108 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 LACTBP83111 547 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CDK17Q00537 523 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MORC3Q14149 939 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 EIF4A2Q14240 407 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 STARD3Q14849 445 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 USP39Q53GS9 565 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TMEM240Q5SV17 173 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CD276Q5ZPR3 534 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF530Q6P9A1 599 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM111BQ6SJ93 734 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PCGF5Q86SE9 256 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM83AQ86UY5 434 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CPA6Q8N4T0 437 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 TUBGCP5Q96RT8 1024 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MCMBPQ9BTE3 642 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 API5Q9BZZ5 524 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 OR10A5Q9H207 317 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF703Q9H7S9 590 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CPA4Q9UI42 421 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CCNL1Q9UK58 526 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 NOX1Q9Y5S8 564 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ANKRD36CQ5JPF3 1778 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CACNA1SQ13698 1873 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 DYTNA2CJ06 578 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PATE3B3GLJ2 98 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 RNASET2O00584 256 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 APAF1O14727 1248 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 RNMTO43148 476 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ATP2A2P16615 1042 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SDHAP31040 664 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SATB1Q01826 763 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 ADAM9Q13443 819 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 LCE5AQ5TCM9 118 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM9BQ8IZU0 186 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CNTROBQ8N137 903 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 STPG3Q8N7X2 389 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC150Q8NCX0 1101 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 Q8TCH9 128 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 NEU4Q8WWR8 484 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PALLDQ8WX93 1383 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MYO3BQ8WXR4 1341 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CHFRQ96EP1 664 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 PDCD2LQ9BRP1 358 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SARGQ9BW04 601 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 APOL5Q9BWW9 433 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 JAM3Q9BX67 310 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 STK31Q9BXU1 1019 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 CELF4Q9BZC1 486 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC13A1Q9BZW2 595 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SMC4Q9NTJ3 1288 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 OXSMQ9NWU1 459 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 RNF186Q9NXI6 227 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MSRAQ9UJ68 235 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 LZTS1Q9Y250 596 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 SIT1Q9Y3P8 196 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 RABGAP1Q9Y3P9 1069 aa2.21□□□□□ -2.06
SMCHD1-211ENST00000584897 MAST2Q6P0Q8 1798 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ABCC12Q96J65 1359 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 H0YGN5 161 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 EPB41L2O43491 1005 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 C1RP00736 705 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 TYRP1P17643 537 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 XBP1P17861 261 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 KCNJ5P48544 419 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ATXN1P54253 815 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SETQ01105 290 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 NEXNQ0ZGT2 675 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SPIDRQ14159 915 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 EIF4HQ15056 248 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PUM3Q15397 648 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 FKBP15Q5T1M5 1219 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 THEMIS2Q5TEJ8 643 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 CST9Q5W186 159 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms