RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 EPHA5P54756 1037 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 CYP24A1Q07973 514 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 KCNB1Q14721 858 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 UBXN2BQ14CS0 331 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 PSMD6Q15008 389 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 SV2CQ496J9 727 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 LMBRD2Q68DH5 695 aaPredicted RBP19.2■□□□□ 0.66
ERBB2-221ENST00000584888 LIMS2Q7Z4I7 341 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 CSGALNACT2Q8N6G5 542 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 RDH13Q8NBN7 331 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 LEMD2Q8NC56 503 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 GOLGA5Q8TBA6 731 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 NOC3LQ8WTT2 800 aaKnown RBP19.2■□□□□ 0.66
ERBB2-221ENST00000584888 ZSWIM3Q96MP5 696 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 ZNF560Q96MR9 790 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 ASB16Q96NS5 453 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 TMEM209Q96SK2 561 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 OSBPL6Q9BZF3 934 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 MTMR12Q9C0I1 747 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 GDAP2Q9NXN4 497 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 CIZ1Q9ULV3 898 aaPredicted RBP19.2■□□□□ 0.66
ERBB2-221ENST00000584888 YIPF1Q9Y548 306 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 COL4A3Q01955 1670 aa19.2■□□□□ 0.66
ERBB2-221ENST00000584888 PDXKO00764 312 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 SP9P0CG40 484 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 GJA1P17302 382 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 RBP5P82980 135 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 DUSP4Q13115 394 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 DUOXA2Q1HG44 320 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 WSCD1Q658N2 575 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 TPRG1Q6ZUI0 275 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 WDR49Q8IV35 697 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 ADSSL1Q8N142 457 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 OR10T2Q8NGX3 314 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 ANKRD36BP1Q96IX9 119 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 BCO2Q9BYV7 579 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 CRISPLD1Q9H336 500 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 LTB4R2Q9NPC1 389 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 ASAH2Q9NR71 780 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 R4GN57 208 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 CACNA1IQ9P0X4 2223 aa19.19■□□□□ 0.66
ERBB2-221ENST00000584888 TMEM191BP0C7N4 346 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 GRM2Q14416 872 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 CENPPQ6IPU0 288 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 MAML2Q8IZL2 1156 aaPredicted RBP19.18■□□□□ 0.66
ERBB2-221ENST00000584888 PLEKHO2Q8TD55 490 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 ZNF516Q92618 1163 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 SMARCD2Q92925 531 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 NELL2Q99435 816 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 CGRRF1Q99675 332 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 ZCWPW1Q9H0M4 648 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 SEMA4AQ9H3S1 761 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 HEBP1Q9NRV9 189 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 SLC27A5Q9Y2P5 690 aa19.18■□□□□ 0.66
ERBB2-221ENST00000584888 MTMR11A4FU01 709 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 EPHB3P54753 998 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 CLDN10P78369 228 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 PLD1Q13393 1074 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 TEAD2Q15562 447 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 TRAPPC11Q7Z392 1133 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 LRRTM3Q86VH5 581 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 PDCL2Q8N4E4 241 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 ATAD1Q8NBU5 361 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 DNASE1L2Q92874 299 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 TRMT61BQ9BVS5 477 aaKnown RBP19.17■□□□□ 0.66
ERBB2-221ENST00000584888 LRRC3Q9BY71 257 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 DNAJC25Q9H1X3 360 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 BRD9Q9H8M2 597 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 HSFX1Q9UBD0 423 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 L1RE1Q9UN81 338 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 MYO15AQ9UKN7 3530 aa19.17■□□□□ 0.66
ERBB2-221ENST00000584888 SHISA7A6NL88 538 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 EXOC3O60645 756 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 PRPF40AO75400 957 aaKnown RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 CST3P01034 146 aaPredicted RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 TNNC2P02585 160 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 TARSP26639 723 aaKnown RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 VIPR2P41587 438 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 ALDH1A3P47895 512 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 FAM160A1Q05DH4 1040 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 BFSP1Q12934 665 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 NFIL3Q16649 462 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 VITQ6UXI7 678 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 ZNF852Q6ZMS4 543 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 GUF1Q8N442 669 aaKnown RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 SPATA20Q8TB22 786 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 SHKBP1Q8TBC3 707 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 ZSCAN18Q8TBC5 510 aaPredicted RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 SPATA18Q8TC71 538 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 PARD3BQ8TEW8 1205 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 CCDC47Q96A33 483 aaKnown RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 CLDN23Q96B33 292 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 TIGD1Q96MW7 591 aa19.16■□□□□ 0.66
ERBB2-221ENST00000584888 SPATA6Q9NWH7 488 aaPredicted RBP19.16■□□□□ 0.66
ERBB2-221ENST00000584888 GOLGA6L4A6NEF3 574 aa19.15■□□□□ 0.66
ERBB2-221ENST00000584888 GABRDO14764 452 aa19.15■□□□□ 0.66
ERBB2-221ENST00000584888 LMNAP02545 664 aaKnown RBP19.15■□□□□ 0.66
ERBB2-221ENST00000584888 KRT19P08727 400 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms