RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TMEM86AQ8N2M4 240 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 FAM200AQ8TCP9 573 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 SMARCD2Q92925 531 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 HPDLQ96IR7 371 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 LPIN3Q9BQK8 851 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 GDPD2Q9HCC8 539 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 ZFP14Q9HCL3 533 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 FAM86C1Q9NVL1 165 aa23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 DDX43Q9NXZ2 648 aaKnown RBP23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 CGNQ9P2M7 1197 aaKnown RBP23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 R3HCC1Q9Y3T6 440 aaKnown RBP23.06■■□□□ 1.28
PPP4R1-228ENST00000584074 TNNI1P19237 187 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 ACAT1P24752 427 aaKnown RBP23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 TSPY1Q01534 308 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 SMARCB1Q12824 385 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 MYO1EQ12965 1108 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 BECN1Q14457 450 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 PSMD6Q15008 389 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 SLC44A4Q53GD3 710 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 PHLDB3Q6NSJ2 640 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 TRAPPC11Q7Z392 1133 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 ALYREFQ86V81 257 aaKnown RBP23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 OSTM1Q86WC4 334 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 C12orf56Q8IXR9 622 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 FSIP1Q8NA03 581 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 ZSCAN18Q8TBC5 510 aaPredicted RBP23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 SPPL2BQ8TCT7 592 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 C2orf15Q8WU43 125 aaKnown RBP23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 FNBP1Q96RU3 617 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 GZF1Q9H116 711 aaPredicted RBP23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 SLITRK6Q9H5Y7 841 aa23.05■■□□□ 1.28
PPP4R1-228ENST00000584074 HCRTO43612 131 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 PRR29P0C7W0 189 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 HAPLN1P10915 354 aaPredicted RBP23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 VIPR2P41587 438 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 PFKPQ01813 784 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 PSMD2Q13200 908 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 GRM2Q14416 872 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 SOWAHAQ2M3V2 549 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 STXBP5Q5T5C0 1151 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 GAREM2Q75VX8 874 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 ITIH5Q86UX2 942 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 ADGRF2Q8IZF7 708 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 TOP6BLQ8N6T0 577 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 GIPC2Q8TF65 315 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 CGRRF1Q99675 332 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 ACBD6Q9BR61 282 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 FOXQ1Q9C009 403 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 GOLPH3LQ9H4A5 285 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 PCDHB5Q9Y5E4 795 aa23.04■■□□□ 1.28
PPP4R1-228ENST00000584074 A0A1W2PQ27 194 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 A0A1W2PQ64 194 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 A0A1W2PQD8 194 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 EXOC3O60645 756 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 RPN1P04843 607 aaKnown RBP23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 MYL1P05976 194 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 MRE11P49959 708 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 STARD6P59095 220 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 MYL7Q01449 175 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 VEPH1Q14D04 833 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 MLF2Q15773 248 aaPredicted RBP23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 CCDC142Q17RM4 750 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 CCDC105Q8IYK2 499 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 DTWD2Q8NBA8 298 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 GOLGA5Q8TBA6 731 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 ATOH1Q92858 354 aaPredicted RBP23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 SHDQ96IW2 340 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 PI4K2AQ9BTU6 479 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 SIT1Q9Y3P8 196 aa23.03■■□□□ 1.28
PPP4R1-228ENST00000584074 GABRDO14764 452 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 PRPF40AO75400 957 aaKnown RBP23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 CST3P01034 146 aaPredicted RBP23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 DCNP07585 359 aaKnown RBP23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 GABRR2P28476 465 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 LHX1P48742 406 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 NFE2Q16621 373 aaPredicted RBP23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 INTS6LQ5JSJ4 861 aaKnown RBP23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 VITQ6UXI7 678 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 LIMS2Q7Z4I7 341 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 ZNF516Q92618 1163 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 PKMYT1Q99640 499 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 GPR88Q9GZN0 384 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 IRF2BPLQ9H1B7 796 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 ATXN3LQ9H3M9 355 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 TRPV4Q9HBA0 871 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 GTF3C4Q9UKN8 822 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 COL4A3Q01955 1670 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 TCHHQ07283 1943 aa23.02■■□□□ 1.28
PPP4R1-228ENST00000584074 CASP4P49662 377 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 GPR15P49685 360 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 KRBA2Q6ZNG9 492 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 DPH6Q7L8W6 267 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 GPIHBP1Q8IV16 184 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 SPATA18Q8TC71 538 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 PLEKHO2Q8TD55 490 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 KBTBD7Q8WVZ9 684 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 RSPRY1Q96DX4 576 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 MKNK1Q9BUB5 465 aa23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 TRMT61BQ9BVS5 477 aaKnown RBP23.01■■□□□ 1.27
PPP4R1-228ENST00000584074 KCTD10Q9H3F6 313 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms