RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 TUBB8Q3ZCM7 444 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CAPRIN2Q6IMN6 1127 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PI4K2AQ9BTU6 479 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 A1CFQ9NQ94 594 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PXMP2Q9NR77 195 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 STK38LQ9Y2H1 464 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 BTNL10A8MVZ5 291 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CLDN3O15551 220 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CLPPQ16740 277 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SPDYCQ5MJ68 293 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCT6BQ92526 530 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 AGPAT1Q99943 283 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 HEMGNQ9BXL5 484 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PLEKHA5Q9HAU0 1116 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FGFR1OP2Q9NVK5 253 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GRHL1Q9NZI5 618 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 AGAP1Q9UPQ3 857 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PPP2R3BQ9Y5P8 575 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 MYH11P35749 1972 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PIAS1O75925 651 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 IL33O95760 270 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCNE2O96020 404 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TMEM253P0C7T8 217 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RARRES1P49788 294 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FSTL1Q12841 308 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ERMARDQ5T6L9 678 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FAM102BQ5T8I3 360 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SCARA3Q6AZY7 606 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SPATS2Q86XZ4 545 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCDC197Q8NCU1 140 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KREMEN1Q96MU8 473 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LBHD1Q9BQE6 289 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PABPC3Q9H361 631 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 HSPBP1Q9NZL4 362 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SSC5DA1L4H1 1573 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LRRC72A6NJI9 287 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CHUKO15111 745 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PGK2P07205 417 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CHKAP35790 457 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KCNJ2P63252 427 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 AGBL2Q5U5Z8 902 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NLRX1Q86UT6 975 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 BSNDQ8WZ55 320 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLC35B4Q969S0 331 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 OPTNQ96CV9 577 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 C8orf48Q96LL4 319 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ALPK1Q96QP1 1244 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 STRA6Q9BX79 667 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FAM129AQ9BZQ8 928 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLC5A4Q9NY91 659 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCDC169A6NNP5 214 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RARAP10276 462 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GZMAP12544 262 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NCAM1P13591 858 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CHRNB2P17787 502 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ADSSP30520 456 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ELF1P32519 619 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GCKP35557 465 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 VAMP7P51809 220 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 EMC10Q5UCC4 262 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PCNX4Q63HM2 1172 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SERINC2Q96SA4 455 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TMEM117Q9H0C3 514 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 BTBD7Q9P203 1132 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TCP11X1B4DZS4 312 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 UPP2O95045 317 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LRP8Q14114 963 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 HAUS6Q7Z4H7 955 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 YTHDF3Q7Z739 585 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LRRC49Q8IUZ0 686 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TAB3Q8N5C8 712 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NSUN6Q8TEA1 469 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ATXN2LQ8WWM7 1075 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SGCDQ92629 289 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TLCD1Q96CP7 247 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CYP39A1Q9NYL5 469 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PFDN2Q9UHV9 154 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TAGLN3Q9UI15 199 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TMEM88BA6NKF7 163 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCT8L1PA6NM43 557 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 O00370 1275 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RASGRF2O14827 1237 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PSMA3P25788 255 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 DNAJA1P31689 397 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 YWHABP31946 246 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PTGIRP43119 386 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ACAP1Q15027 740 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KYNUQ16719 465 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms