RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 CMPK2Q5EBM0 449 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 KRT39Q6A163 491 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 SLC39A4Q6P5W5 647 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 BTNL9Q6UXG8 535 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 MTDHQ86UE4 582 aaKnown RBP11.07□□□□□ -0.64
TOP3A-214ENST00000582981 SESTD1Q86VW0 696 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 INPP5DQ92835 1189 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 MAGEB18Q96M61 343 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 IWS1Q96ST2 819 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 DCLK3Q9C098 648 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 DDX18Q9NVP1 670 aaKnown RBP11.07□□□□□ -0.64
TOP3A-214ENST00000582981 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 PARP2Q9UGN5 583 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 GRID1Q9ULK0 1009 aa11.07□□□□□ -0.64
TOP3A-214ENST00000582981 ASTN2O75129 1339 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 GYG2O15488 501 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 DCTN3O75935 186 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 VIL1P09327 827 aaKnown RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 ATP5DP30049 168 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 QARSP47897 775 aaKnown RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 DRG2P55039 364 aaKnown RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 OCRLQ01968 901 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 THOC5Q13769 683 aaKnown RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 SMTNL2Q2TAL5 461 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 SMC6Q96SB8 1091 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 TTC1Q99614 292 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 ZNF341Q9BYN7 854 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 ANKFY1Q9P2R3 1169 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 DNPEPQ9ULA0 475 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 ZNF148Q9UQR1 794 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 PEX10O60683 326 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 CCNE2O96020 404 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 P4HBP07237 508 aaKnown RBP11.06□□□□□ -0.64
TOP3A-214ENST00000582981 PTPN4P29074 926 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 CBX3Q13185 183 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 ORC1Q13415 861 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 PPP2R5EQ16537 467 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 SH2D4BQ5SQS7 431 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 FBXL13Q8NEE6 735 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 WNK4Q96J92 1243 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 MIPEPQ99797 713 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 MAF1Q9H063 256 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 NPHS2Q9NP85 383 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 PTPRJQ12913 1337 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
TOP3A-214ENST00000582981 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 GAS8O95995 478 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 FGFR1P11362 822 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 LSAMPQ13449 338 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 WDR72Q3MJ13 1102 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ACAD10Q6JQN1 1059 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 MAP7D3Q8IWC1 876 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 SMC1BQ8NDV3 1235 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 CEP70Q8NHQ1 597 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 WDR60Q8WVS4 1066 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 DDX1Q92499 740 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 RUNDC3BQ96NL0 473 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 CADM1Q9BY67 442 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 KMT5AQ9NQR1 393 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ATAD5Q96QE3 1844 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 YDJCA8MPS7 323 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 PDLIM1O00151 329 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 DHX15O43143 795 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 OR6B1O95007 311 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 MAP3K6O95382 1288 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 PSMG1O95456 288 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 CYP1A2P05177 515 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ITGA2BP08514 1039 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 CA4P22748 312 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 NSFP46459 744 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 CCDC15Q0P6D6 951 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 KCNT1Q5JUK3 1230 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 PCNX4Q63HM2 1172 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 SCARA5Q6ZMJ2 495 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 PODNQ7Z5L7 613 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ZBED8Q8IZ13 594 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 GRAMD1AQ96CP6 724 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 CEP170P1Q96L14 293 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 STRA6Q9BX79 667 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 IDI2Q9BXS1 227 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ASCC2Q9H1I8 757 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 TMEM206Q9H813 350 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 MRPL11Q9Y3B7 192 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 COMMD3-BMI1R4GMX3 469 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 MAGEB3O15480 346 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 PENKP01210 267 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 FDX1P10109 184 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 NPR1P16066 1061 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 HSPA6P17066 643 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 RPA3P35244 121 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 YARSP54577 528 aaKnown RBP11.05□□□□□ -0.64
TOP3A-214ENST00000582981 ZBTB16Q05516 673 aa11.05□□□□□ -0.64
TOP3A-214ENST00000582981 GPS1Q13098 491 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms