RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 FZD8Q9H461 694 aa14.46□□□□□ -0.09
SRSF1-205ENST00000582730 ACTR5Q9H9F9 607 aaPredicted RBP14.46□□□□□ -0.09
SRSF1-205ENST00000582730 SIP14410 1827 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 GPR25O00155 361 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 RIPK2O43353 540 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 ITGB3P05106 788 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 LGALS2P05162 132 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 NUDT17P0C025 328 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 YBX3P16989 372 aaKnown RBP eCLIP14.46□□□□□ -0.1
SRSF1-205ENST00000582730 CHKAP35790 457 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 ASPAP45381 313 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 PHKA2P46019 1235 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 SLC26A2P50443 739 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 GRM1Q13255 1194 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 AFG1LQ8WV93 481 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 HAUS2Q9NVX0 235 aa14.46□□□□□ -0.1
SRSF1-205ENST00000582730 SBF1O95248 1867 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 RARGP13631 454 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 MAN1A1P33908 653 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 NFX1Q12986 1120 aaKnown RBP14.45□□□□□ -0.1
SRSF1-205ENST00000582730 DENND1BQ6P3S1 775 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 KATNAL2Q8IYT4 538 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 ATL2Q8NHH9 583 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 CDC42EP4Q9H3Q1 356 aaKnown RBP14.45□□□□□ -0.1
SRSF1-205ENST00000582730 SLC12A6Q9UHW9 1150 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 ANAPC5Q9UJX4 755 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 IVNS1ABPQ9Y6Y0 642 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 EVPLQ92817 2033 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 PCNTO95613 3336 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 LRRD1A4D1F6 860 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 C22orf31O95567 290 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 ADORA2AP29274 412 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 ADCYAP1R1P41586 468 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 CCDC38Q502W7 563 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 SPDYCQ5MJ68 293 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 PPP1R2P3Q6NXS1 205 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 UBR7Q8N806 425 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 GPRC5AQ8NFJ5 357 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 NLRP7Q8WX94 980 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 MIEF2Q96C03 454 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 XYLT2Q9H1B5 865 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 TJP2Q9UDY2 1190 aa14.45□□□□□ -0.1
SRSF1-205ENST00000582730 TMEM191CA6NGB0 347 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 LACTBL1A8MY62 500 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 RASGRF2O14827 1237 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 CLGNO14967 610 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 TRAPPC3O43617 180 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 STAG3L1P0CL83 205 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 IFI35P80217 286 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ARHGAP1Q07960 439 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ANKRD20A8PQ5CZ79 823 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 JADE1Q6IE81 842 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 EXD1Q8NHP7 514 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 SMYD3Q9H7B4 428 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 PTPRHQ9HD43 1115 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 PRMT7Q9NVM4 692 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 WHRNQ9P202 907 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 PNMA3Q9UL41 463 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 LSM8O95777 96 aaKnown RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 PROZP22891 400 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 OGDHQ02218 1023 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ADCY2Q08462 1091 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 LONRF1Q17RB8 773 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 SMTNL2Q2TAL5 461 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 TXNRD3NBQ6F5E7 133 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 MFSD7Q6UXD7 560 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 USP50Q70EL3 339 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 SGSM3Q96HU1 749 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 TPX2Q9ULW0 747 aaKnown RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ZNF148Q9UQR1 794 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 TNFSF13BQ9Y275 285 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 B4GALT4O60513 344 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ITIH2P19823 946 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 YWHAEP62258 255 aaKnown RBP14.44□□□□□ -0.1
SRSF1-205ENST00000582730 DYNLT1P63172 113 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 PLCB3Q01970 1234 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ZNF252P-AS1Q0IIN9 211 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 SF3A3Q12874 501 aaKnown RBP eCLIP14.44□□□□□ -0.16e-7■■■□□ 17.6
SRSF1-205ENST00000582730 PTK6Q13882 451 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 WDTC1Q8N5D0 677 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 C1orf127Q8N9H9 656 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 PPP1R13LQ8WUF5 828 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 SEC16BQ96JE7 1060 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ZWILCHQ9H900 591 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 IFT122Q9HBG6 1241 aa14.44□□□□□ -0.1
SRSF1-205ENST00000582730 ASAP2O43150 1006 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 ATP2C2O75185 946 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 GH1P01241 217 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 PSMA2P25787 234 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 CCNA1P78396 465 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 KLF1Q13351 362 aaPredicted RBP14.43□□□□□ -0.1
SRSF1-205ENST00000582730 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 BYSLQ13895 437 aaKnown RBP14.43□□□□□ -0.1
SRSF1-205ENST00000582730 E2F5Q15329 346 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 IZUMO3Q5VZ72 239 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
SRSF1-205ENST00000582730 HOMER3Q9NSC5 361 aa14.43□□□□□ -0.1
SRSF1-205ENST00000582730 HMGXB4Q9UGU5 601 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms