RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FAM20CQ8IXL6 584 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 NME8Q8N427 588 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 NOC3LQ8WTT2 800 aaKnown RBP11.18□□□□□ -0.62
SS18-221ENST00000582448 DHTKD1Q96HY7 919 aaPredicted RBP11.18□□□□□ -0.62
SS18-221ENST00000582448 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
SS18-221ENST00000582448 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 EIF2AK1Q9BQI3 630 aaKnown RBP11.18□□□□□ -0.62
SS18-221ENST00000582448 S1PR5Q9H228 398 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 C7orf69Q9H7B7 122 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 ERVK-5Q9HDB9 667 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 FANCLQ9NW38 375 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 ST3GAL5Q9UNP4 418 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 CTNND2Q9UQB3 1225 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 SAMM50Q9Y512 469 aa11.18□□□□□ -0.62
SS18-221ENST00000582448 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 HMX2A2RU54 273 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
SS18-221ENST00000582448 MED24O75448 989 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 TIAF1O95411 115 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 TPM2P07951 284 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 ARP10275 920 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 MAOBP27338 520 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 SFNP31947 248 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 JAK3P52333 1124 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 UBASH3AP57075 661 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 ACTR2P61160 394 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 FANCCQ00597 558 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 NCAPHQ15003 741 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 EXOSC6Q5RKV6 272 aaKnown RBP11.17□□□□□ -0.62
SS18-221ENST00000582448 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 ADSSL1Q8N142 457 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
SS18-221ENST00000582448 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
SS18-221ENST00000582448 RGS18Q9NS28 235 aa11.17□□□□□ -0.62
SS18-221ENST00000582448 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
SS18-221ENST00000582448 MYMKA6NI61 221 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 HIDE1A8MVS5 230 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 E9PMD0 336 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
SS18-221ENST00000582448 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
SS18-221ENST00000582448 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 DRD2P14416 443 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 LAG3P18627 525 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 PBX3P40426 434 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 STX17P56962 302 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 GSDMDP57764 484 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 KIZQ2M2Z5 673 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 ODR4Q5SWX8 454 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 ARTNQ5T4W7 220 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 DYMQ7RTS9 669 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 PLPPR4Q7Z2D5 763 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 FAM114A1Q8IWE2 563 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
SS18-221ENST00000582448 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
SS18-221ENST00000582448 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 TMEM40Q8WWA1 233 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 TSG101Q99816 390 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 CWH43Q9H720 699 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 PANK4Q9NVE7 773 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 IFNKQ9P0W0 207 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 IMPACTQ9P2X3 320 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 NR2E1Q9Y466 385 aa11.16□□□□□ -0.62
SS18-221ENST00000582448 TRIOO75962 3097 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 C2CD4DB7Z1M9 353 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 C9IYK1 514 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 AP5Z1O43299 807 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 KLRC4O43908 158 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 HBP1O60381 514 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.62
SS18-221ENST00000582448 PRCPP42785 496 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 KRT17Q04695 432 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 POU4F3Q15319 338 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 ENOX2Q16206 610 aaKnown RBP11.15□□□□□ -0.62
SS18-221ENST00000582448 COBLL1Q53SF7 1204 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 CES5AQ6NT32 575 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 METTL13Q8N6R0 699 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 TMEM105Q8N8V8 129 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
SS18-221ENST00000582448 RDM1Q8NG50 284 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 DYDC2Q96IM9 177 aa11.15□□□□□ -0.62
SS18-221ENST00000582448 HSD17B14Q9BPX1 270 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms