RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 WEE2P0C1S8 567 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 ATP1A3P13637 1013 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 ATF2P15336 505 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 EPCAMP16422 314 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 LMO2P25791 158 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 LRMPQ12912 555 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 CUL2Q13617 745 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 FKBP15Q5T1M5 1219 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 RTL10Q7L3V2 364 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 UNC93AQ86WB7 457 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 KREMEN2Q8NCW0 462 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 FAM81BQ96LP2 452 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 CRACR2AQ9BSW2 395 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 DNAI2Q9GZS0 605 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 AFF4Q9UHB7 1163 aaKnown RBP21.42■■□□□ 1.02
TOP3A-213ENST00000582230 PRRC2BQ5JSZ5 2229 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 LINC01565O15544 149 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 GLP2RO95838 553 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 PDGFRBP09619 1106 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 TRIM21P19474 475 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 ELF1P32519 619 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 RAP1GAPP47736 663 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 YWHAEP62258 255 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 GCNT1Q02742 428 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 INCA1Q0VD86 236 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 MAPRE1Q15691 268 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 NFE2Q16621 373 aaPredicted RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 INTS6LQ5JSJ4 861 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 TRIM65Q6PJ69 517 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 APTXQ7Z2E3 356 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 C2orf15Q8WU43 125 aaKnown RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 HLA-CQ95604 372 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 TNIP3Q96KP6 325 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 TMEM209Q96SK2 561 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 SYT15Q9BQS2 421 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 FBXW11Q9UKB1 542 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 BARX2Q9UMQ3 279 aaPredicted RBP21.41■■□□□ 1.02
TOP3A-213ENST00000582230 COG5Q9UP83 839 aa21.41■■□□□ 1.02
TOP3A-213ENST00000582230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.4■■□□□ 1.02
TOP3A-213ENST00000582230 LGALS16A8MUM7 142 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 OR4Q2P0C623 313 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 HOXB8P17481 243 aaPredicted RBP21.4■■□□□ 1.02
TOP3A-213ENST00000582230 SLC9A1P19634 815 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 ACAT1P24752 427 aaKnown RBP21.4■■□□□ 1.02
TOP3A-213ENST00000582230 PON1P27169 355 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 UVSSAQ2YD98 709 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 SLC39A12Q504Y0 691 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 RNF19BQ6ZMZ0 732 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 EP400NLQ6ZTU2 488 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 CCDC149Q6ZUS6 474 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 PPM1KQ8N3J5 372 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 MAN1C1Q9NR34 630 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 HSFX1Q9UBD0 423 aa21.4■■□□□ 1.02
TOP3A-213ENST00000582230 ATG2AQ2TAZ0 1938 aa21.39■■□□□ 1.02
TOP3A-213ENST00000582230 SPATA31D3P0C874 917 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 NDST1P52848 882 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 RBM10P98175 930 aaKnown RBP21.39■■□□□ 1.01
TOP3A-213ENST00000582230 ADCY1Q08828 1119 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 FILIP1LQ4L180 1135 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 LIN9Q5TKA1 542 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 PHLDB3Q6NSJ2 640 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 ANKRD54Q6NXT1 300 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 FAM171BQ6P995 826 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 SPATA31D4Q6ZUB0 917 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 ENOSF1Q7L5Y1 443 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 LRRTM3Q86VH5 581 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 TCEAL8Q8IYN2 117 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 JAKMIP2Q96AA8 810 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 PKMYT1Q99640 499 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 NT5C1AQ9BXI3 368 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 UBE2ZQ9H832 354 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-213ENST00000582230 CISHQ9NSE2 258 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 CLEC1BQ9P126 229 aa21.39■■□□□ 1.01
TOP3A-213ENST00000582230 SPDYE4A6NLX3 237 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 PRRG1O14668 218 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 HCRTO43612 131 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 CILPO75339 1184 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 PTPN1P18031 435 aaKnown RBP21.38■■□□□ 1.01
TOP3A-213ENST00000582230 CD58P19256 250 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 LTBRP36941 435 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 UBXN1Q04323 297 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 KCNMA1Q12791 1236 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 SMYD5Q6GMV2 418 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 RRAGAQ7L523 313 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 CRYBG2Q8N1P7 616 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 B3GALNT2Q8NCR0 500 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 SPPL2BQ8TCT7 592 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 PGLYRP2Q96PD5 576 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 ARID3AQ99856 593 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 CYP4F11Q9HBI6 524 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 ZDHHC7Q9NXF8 308 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 APEX2Q9UBZ4 518 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 GTF3C4Q9UKN8 822 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 NME7Q9Y5B8 376 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 PCDHB5Q9Y5E4 795 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 TSC2P49815 1807 aa21.38■■□□□ 1.01
TOP3A-213ENST00000582230 MYBPHLA2RUH7 354 aa21.37■■□□□ 1.01
TOP3A-213ENST00000582230 MTMR11A4FU01 709 aa21.37■■□□□ 1.01
TOP3A-213ENST00000582230 ATP2C2O75185 946 aa21.37■■□□□ 1.01
TOP3A-213ENST00000582230 TBX10O75333 385 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms