RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ENPEP	Q07075	957 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	BFSP1	Q12934	665 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	STK4	Q13043	487 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KCNB1	Q14721	858 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MAPRE1	Q15691	268 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KMT5B	Q4FZB7	885 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	IER5L	Q5T953	404 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CWF19L1	Q69YN2	538 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TRAPPC11	Q7Z392	1133 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TMC8	Q8IU68	726 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GRAMD1C	Q8IYS0	662 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	FSIP1	Q8NA03	581 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KIAA0895	Q8NCT3	520 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	PRSS33	Q8NF86	280 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	OR5B17	Q8NGF7	314 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DEPDC1B	Q8WUY9	529 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ING5	Q8WYH8	240 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DNASE1L2	Q92874	299 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SMARCD2	Q92925	531 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TCEAL4	Q96EI5	215 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	OSBPL6	Q9BZF3	934 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TRPV5	Q9NQA5	729 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DMAC2	Q9NW81	257 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	L1RE1	Q9UN81	338 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SLC27A5	Q9Y2P5	690 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SNX9	Q9Y5X1	595 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	PTPRJ	Q12913	1337 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KRBA1	A5PL33	1030 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CLIC2	O15247	247 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MAPK13	O15264	365 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MOSPD3	O75425	235 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	HAPLN1	P10915	354 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MYL4	P12829	197 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	RFX1	P22670	979 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CDC25C	P30307	473 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	HOXD11	P31277	338 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CYP2J2	P51589	502 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MLLT6	P55198	1093 aa	Predicted RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	RPL10A	P62906	217 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	NFIL3	Q16649	462 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SOWAHA	Q2M3V2	549 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MGAT5B	Q3V5L5	792 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CFAP221	Q4G0U5	840 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	INTS6L	Q5JSJ4	861 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	FAM78A	Q5JUQ0	283 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KRBA2	Q6ZNG9	492 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	LRRTM3	Q86VH5	581 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ADGRF2	Q8IZF7	708 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	HS6ST3	Q8IZP7	471 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TMEM105	Q8N8V8	129 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	FLCN	Q8NFG4	579 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SHKBP1	Q8TBC3	707 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TMEM209	Q96SK2	561 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	NELL2	Q99435	816 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	RPP25	Q9BUL9	199 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DDX23	Q9BUQ8	820 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GTPBP4	Q9BZE4	634 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KCTD10	Q9H3F6	313 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DDX43	Q9NXZ2	648 aa	Known RBP	13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	OBP2A	Q9NY56	170 aa		13.51	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TULP1	O00294	542 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CALU	O43852	315 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TACC1	O75410	805 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ZNF202	O95125	648 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DLAT	P10515	647 aa	Known RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GLUL	P15104	373 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	FCAR	P24071	287 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MAGEA9	P43362	315 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MAGEA11	P43364	429 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TCF15	Q12870	199 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	DPYD	Q12882	1025 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SLC44A4	Q53GD3	710 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ARHGAP15	Q53QZ3	475 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TANGO2	Q6ICL3	276 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	C4orf50	Q6ZRC1	276 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CCDC105	Q8IYK2	499 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GUF1	Q8N442	669 aa	Known RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	RDH13	Q8NBN7	331 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TMC2	Q8TDI7	906 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	IRF7	Q92985	503 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SYAP1	Q96A49	352 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CCDC127	Q96BQ5	260 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GCNA	Q96QF7	691 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	SEPT5	Q99719	369 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	KXD1	Q9BQD3	176 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TRMT61B	Q9BVS5	477 aa	Known RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	VRTN	Q9H8Y1	702 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TBC1D17	Q9HA65	648 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ABI2	Q9NYB9	513 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CDH9	Q9ULB4	789 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TRAF3IP3	Q9Y228	551 aa		13.5	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.49	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GOLGA6L4	A6NEF3	574 aa		13.49	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	IKBKB	O14920	756 aa		13.49	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CSH1	P0DML2	217 aa		13.49	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CSH2	P0DML3	217 aa		13.49	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	PSMC3	P17980	439 aa		13.49	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ATF6	P18850	670 aa		13.49	□□□□□ -0.25

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