RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 PTPRZ1P23471 2315 aaPredicted RBP22.92■■□□□ 1.26
CSNK1D-216ENST00000581108 F5P12259 2224 aa22.92■■□□□ 1.26
CSNK1D-216ENST00000581108 PTPRJQ12913 1337 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 HUS1O60921 280 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 TMEM191BP0C7N4 346 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 GABRR2P28476 465 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 GDI1P31150 447 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 AFMP43652 599 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 RBP5P82980 135 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 EHHADHQ08426 723 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 SMARCB1Q12824 385 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 UNC13DQ70J99 1090 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 ITIH5Q86UX2 942 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 C1orf210Q8IVY1 113 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 DCP1BQ8IZD4 617 aaKnown RBP22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 OR5B17Q8NGF7 314 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 GIPC2Q8TF65 315 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 C2orf15Q8WU43 125 aaKnown RBP22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 DNASE1L2Q92874 299 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 RSPRY1Q96DX4 576 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 OSBPL6Q9BZF3 934 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 ATXN3LQ9H3M9 355 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 MAGEF1Q9HAY2 307 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 LTB4R2Q9NPC1 389 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 INTS13Q9NVM9 706 aa22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 ABI2Q9NYB9 513 aaPredicted RBP22.91■■□□□ 1.26
CSNK1D-216ENST00000581108 SHISA7A6NL88 538 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 HEPACAM2A8MVW5 462 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 TGFB1I1O43294 461 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 HAPLN1P10915 354 aaPredicted RBP22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 MFSD6LQ8IWD5 586 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 NELFCDQ8IXH7 590 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 RDH13Q8NBN7 331 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 SPPL2BQ8TCT7 592 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 SCFD1Q8WVM8 642 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 IRF7Q92985 503 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 ANKRD36BP1Q96IX9 119 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 MKNK1Q9BUB5 465 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 GDAP2Q9NXN4 497 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 SNX9Q9Y5X1 595 aa22.9■■□□□ 1.26
CSNK1D-216ENST00000581108 WDR87Q6ZQQ6 2873 aa22.89■■□□□ 1.26
CSNK1D-216ENST00000581108 COL4A2P08572 1712 aa22.89■■□□□ 1.26
CSNK1D-216ENST00000581108 DENND4CQ5VZ89 1909 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 PRR23AA6NEV1 266 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 CLIC2O15247 247 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 ACAT1P24752 427 aaKnown RBP22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 TARSP26639 723 aaKnown RBP22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 TSPY1Q01534 308 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 CUL4BQ13620 913 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 VEPH1Q14D04 833 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 ZNF852Q6ZMS4 543 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 ARID3BQ8IVW6 561 aaPredicted RBP22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 GRAMD1CQ8IYS0 662 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 DEPDC1BQ8WUY9 529 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 NKD2Q969F2 451 aaPredicted RBP22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 NELL2Q99435 816 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 ACBD6Q9BR61 282 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 BCO2Q9BYV7 579 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 KIAA1586Q9HCI6 787 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 AGPAT3Q9NRZ7 376 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 DDX43Q9NXZ2 648 aaKnown RBP22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 PCDHB5Q9Y5E4 795 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 CFAP54Q96N23 3096 aa22.89■■□□□ 1.25
CSNK1D-216ENST00000581108 NUP210Q8TEM1 1887 aaPredicted RBP22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 FAM186AA6NE01 2351 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 ZNF263O14978 683 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 FGF19O95750 216 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 SURF1Q15526 300 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 DUOXA2Q1HG44 320 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 GPR158Q5T848 1215 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 OSTM1Q86WC4 334 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 TMEM86AQ8N2M4 240 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 E2F7Q96AV8 911 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 PI4K2AQ9BTU6 479 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 IL21Q9HBE4 155 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 SLC39A2Q9NP94 309 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 SERTAD1Q9UHV2 236 aa22.88■■□□□ 1.25
CSNK1D-216ENST00000581108 PATJQ8NI35 1801 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 PVALEFA0A1B0GWK0 134 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 HCRTO43612 131 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 TNNC2P02585 160 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 SP9P0CG40 484 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 CYP2J2P51589 502 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 CYP4F8P98187 520 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 TAF12Q16514 161 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 SNRNP35Q16560 246 aaKnown RBP22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 SOWAHAQ2M3V2 549 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 ARHGAP15Q53QZ3 475 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 MAML2Q8IZL2 1156 aaPredicted RBP22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 TOP6BLQ8N6T0 577 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 HPDLQ96IR7 371 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 CHAMP1Q96JM3 812 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 TRPV5Q9NQA5 729 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 SPATA6Q9NWH7 488 aaPredicted RBP22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 GTF3C4Q9UKN8 822 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 ZDHHC9Q9Y397 364 aa22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 R3HCC1Q9Y3T6 440 aaKnown RBP22.87■■□□□ 1.25
CSNK1D-216ENST00000581108 UBE4BO95155 1302 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 FANCMQ8IYD8 2048 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 PRPF40AO75400 957 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms