RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 EPM2AIP1Q7L775 607 aaPredicted RBP15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 GPD1LQ8N335 351 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 TOP6BLQ8N6T0 577 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 C1orf127Q8N9H9 656 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 ZBTB44Q8NCP5 570 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 ZNF507Q8TCN5 953 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 FUBP3Q96I24 572 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 PGLYRP2Q96PD5 576 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 FAM213AQ9BRX8 229 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 MKNK1Q9BUB5 465 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 CHRDQ9H2X0 955 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 TASP1Q9H6P5 420 aa15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 PRMT8Q9NR22 394 aaPredicted RBP15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 ZNF638Q14966 1978 aaKnown RBP15.62■□□□□ 0.09
SMARCE1-216ENST00000580419 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 HEPACAM2A8MVW5 462 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 GABRDO14764 452 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 OR4Q2P0C623 313 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 HAPLN1P10915 354 aaPredicted RBP15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 TARSP26639 723 aaKnown RBP15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 LHX1P48742 406 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 RBP5P82980 135 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 TSPY1Q01534 308 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 UBXN2BQ14CS0 331 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 TEAD2Q15562 447 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 CFAP221Q4G0U5 840 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 ARHGAP29Q52LW3 1261 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 WSCD1Q658N2 575 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 IL21Q9HBE4 155 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 HEBP1Q9NRV9 189 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 PCDHB5Q9Y5E4 795 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 OBSL1O75147 1896 aa15.61■□□□□ 0.09
SMARCE1-216ENST00000580419 PVALEFA0A1B0GWK0 134 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 A0A1W2PRU2 124 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 NRG2O14511 850 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 HUS1O60921 280 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PAPSS2O95340 614 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 ATF6P18850 670 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PCSK1P29120 753 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 GDI1P31150 447 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 MYL7Q01449 175 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PPP2R5DQ14738 602 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 DUOXA2Q1HG44 320 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 SLC39A12Q504Y0 691 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 LRRTM3Q86VH5 581 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 RALGPS2Q86X27 583 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 ARID3BQ8IVW6 561 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 C12orf56Q8IXR9 622 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PDCL2Q8N4E4 241 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 TRMT2BQ96GJ1 504 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 MYRFLQ96LU7 910 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PKMYT1Q99640 499 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 CBWD1Q9BRT8 395 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 INTS13Q9NVM9 706 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 CFAP45Q9UL16 551 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 SLC27A5Q9Y2P5 690 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 MTF2Q9Y483 593 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 GREB1Q4ZG55 1949 aa15.6■□□□□ 0.09
SMARCE1-216ENST00000580419 PTPRDP23468 1912 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 LILRB5O75023 590 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ITGB3P05106 788 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 CSH1P0DML2 217 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 CSH2P0DML3 217 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ZSCAN22P10073 491 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 PFKLP17858 780 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 GABRR2P28476 465 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 POLR2BP30876 1174 aaKnown RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 NRLP54845 237 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 RPL10AP62906 217 aaKnown RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 TFAMQ00059 246 aaKnown RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 MYO1EQ12965 1108 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ZNF268Q14587 947 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 BMT2Q1RMZ1 405 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 SHC4Q6S5L8 630 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 WDR49Q8IV35 697 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ADSSL1Q8N142 457 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 TMEM130Q8N3G9 435 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 SYNPOQ8N3V7 929 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 PDILTQ8N807 584 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 KIAA1958Q8N8K9 716 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ANKRD36BP1Q96IX9 119 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 GCNAQ96QF7 691 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 TMEM209Q96SK2 561 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 SLITRK6Q9H5Y7 841 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 KIF9Q9HAQ2 790 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 SPATA6Q9NWH7 488 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ZSCAN32Q9NX65 697 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 TBC1D7Q9P0N9 293 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 UXTQ9UBK9 157 aaPredicted RBP15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 AGAP1Q9UPQ3 857 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 PIAS3Q9Y6X2 628 aa15.59■□□□□ 0.09
SMARCE1-216ENST00000580419 ANAPC1Q9H1A4 1944 aa15.58■□□□□ 0.09
SMARCE1-216ENST00000580419 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 KINO60870 393 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 STAU1O95793 577 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 MYL1P05976 194 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 HMGA1P17096 107 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 HOXA6P31267 233 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms