RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 C17orf80Q9BSJ5 609 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 FTOQ9C0B1 505 aaKnown RBP eCLIP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 ARMT1Q9H993 441 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 KANSL2Q9H9L4 492 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 A1CFQ9NQ94 594 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 DLL4Q9NR61 685 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 RIC8BQ9NVN3 520 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 MUTYHQ9UIF7 546 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 CBLCQ9ULV8 474 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 Q9Y3F1 56 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 ATP23Q9Y6H3 246 aa7.55□□□□□ -1.2
PPP4R1-216ENST00000580283 ZNF536O15090 1300 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 CFAP47Q6ZTR5 3102 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 CACNA1BQ00975 2339 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 PLD2O14939 933 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 NBNO60934 754 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 BCAR3O75815 825 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 BAIAP3O94812 1187 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 NDUFB10O96000 172 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 CYP1A1P04798 512 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 ENO2P09104 434 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 SUPT20HL2P0C7V6 817 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 ATP8B2P98198 1209 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 FIGNQ5HY92 759 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 PRR31Q5SQ13 230 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 FAM124AQ86V42 546 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 ADHFE1Q8IWW8 467 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 FBXO16Q8IX29 292 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 FAM9BQ8IZU0 186 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 CHST13Q8NET6 341 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 MORC4Q8TE76 937 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 SH3RF2Q8TEC5 729 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 EDAQ92838 391 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 RELTQ969Z4 430 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 CRNKL1Q9BZJ0 848 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 ADAM7Q9H2U9 754 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 SH2D4AQ9H788 454 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 KIAA1217Q5T5P2 1943 aa7.54□□□□□ -1.2
PPP4R1-216ENST00000580283 ZNF532Q9HCE3 1301 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 IGKV6D-41A0A0C4DH26 115 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 NOBOXO60393 691 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 FBXO21O94952 628 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 CXCL10P02778 98 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 GNAI2P04899 355 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 CKMP06732 381 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 ZNF28P17035 718 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 GJA4P35212 333 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 JAM2P57087 298 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 MUM1L1Q5H9M0 696 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 CD276Q5ZPR3 534 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 CTR9Q6PD62 1173 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 TRMT10BQ6PF06 316 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 ASCL5Q7RTU5 278 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 PROSER1Q86XN7 944 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 CISD2Q8N5K1 135 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 DTX3Q8N9I9 347 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 NYAP2Q9P242 653 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 WASF3Q9UPY6 502 aa7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-216ENST00000580283 EPG5Q9HCE0 2579 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 TMEM221A6NGB7 291 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 ASB14A6NK59 587 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 ZNF561-AS1K7EIQ3 104 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 M0R296 226 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 MAN2B1O00754 1011 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 ZEB2O60315 1214 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 ZBED4O75132 1171 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 SURF6O75683 361 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 AMY2AP04746 511 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 MYL3P08590 195 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 PTPN1P18031 435 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 AMY2BP19961 511 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 RARSP54136 660 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 HTRA4P83105 476 aaPredicted RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 SMAD2Q15796 467 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 SKIDA1Q1XH10 827 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 DUSP28Q4G0W2 176 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 UBXN11Q5T124 520 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 NFRKBQ6P4R8 1299 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 TMED8Q6PL24 325 aaPredicted RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 ARHGAP45Q92619 1136 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 PABPC5Q96DU9 382 aaKnown RBP7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 TMEM168Q9H0V1 697 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 ARHGAP20Q9P2F6 1191 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 FBXO40Q9UH90 709 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 COQ6Q9Y2Z9 468 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 GVINP1Q7Z2Y8 2422 aa7.52□□□□□ -1.21
PPP4R1-216ENST00000580283 KIAA1671Q9BY89 1806 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms