RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	NIPA1	Q7RTP0	329 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	RABEPK	Q7Z6M1	372 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	PLA2G4D	Q86XP0	818 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	MINDY1	Q8N5J2	469 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	SMG8	Q8ND04	991 aa	Known RBP	6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	TSTD1	Q8NFU3	115 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	ZNF461	Q8TAF7	563 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	PI4K2B	Q8TCG2	481 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	HASPIN	Q8TF76	798 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	RABGGTA	Q92696	567 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	WBP1	Q96G27	269 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	SPACA7	Q96KW9	195 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	FAM227B	Q96M60	508 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	JPH2	Q9BR39	696 aa	Predicted RBP	6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	ZNF577	Q9BSK1	485 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	PI4K2A	Q9BTU6	479 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	SPZ1	Q9BXG8	430 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	TPSD1	Q9BZJ3	242 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	TRIM6	Q9C030	488 aa	Predicted RBP	6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	ZBTB40	Q9NUA8	1239 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	THG1L	Q9NWX6	298 aa	Known RBP	6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	SUCLA2	Q9P2R7	463 aa	Predicted RBP	6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	TPCN1	Q9ULQ1	816 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	CDY1	Q9Y6F8	540 aa		6.65	□□□□□ -1.34
KPNB1-209	ENST00000580158	ZMYM2	Q9UBW7	1377 aa		6.65	□□□□□ -1.35
KPNB1-209	ENST00000580158	PTPRQ	Q9UMZ3	2332 aa		6.65	□□□□□ -1.35
KPNB1-209	ENST00000580158	TEP1	Q99973	2627 aa	Known RBP	6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	HELZ	P42694	1942 aa	Known RBP	6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	PTPN13	Q12923	2485 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158		A0A0D9SFI3	127 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	KRT38	O76015	456 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	SERPINF2	P08697	491 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	FAM157B	P0CG42	384 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	SPATA31C1	P0DKV0	1188 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	C6	P13671	934 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	BCKDHB	P21953	392 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	AXL	P30530	894 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	HOXD12	P35452	270 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	EIF2S3	P41091	472 aa	Known RBP	6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	CCR2	P41597	374 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	PRKCE	Q02156	737 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	TRDN	Q13061	729 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	PSMD2	Q13200	908 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	DRP2	Q13474	957 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	SART3	Q15020	963 aa	Known RBP	6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	TEAD2	Q15562	447 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	MTERF2	Q49AM1	385 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	UBXN11	Q5T124	520 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	LYSMD4	Q5XG99	296 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	ARMCX6	Q7L4S7	300 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	SRGAP1	Q7Z6B7	1085 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	CATIP	Q7Z7H3	387 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	TICAM2	Q86XR7	235 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	NAXD	Q8IW45	347 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	RPLP0P6	Q8NHW5	317 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	CTCFL	Q8NI51	663 aa	Predicted RBP	6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	CCDC26	Q8TAB7	109 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	ZFYVE19	Q96K21	471 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	CAMK1G	Q96NX5	476 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	LZTS2	Q9BRK4	669 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	CYP4F11	Q9HBI6	524 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	NEUROD4	Q9HD90	331 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	ASAH2	Q9NR71	780 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	TMEM74B	Q9NUR3	256 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	SNTG2	Q9NY99	539 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	MTRR	Q9UBK8	725 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	MYLK	Q15746	1914 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	PCDH15	Q96QU1	1955 aa		6.64	□□□□□ -1.35
KPNB1-209	ENST00000580158	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	WDR64	B1ANS9	1081 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	TMEM229A	B2RXF0	380 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	TRDMT1	O14717	391 aa	Known RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	IFIT3	O14879	490 aa	Known RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	DHX15	O43143	795 aa	Known RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	ALDH1A2	O94788	518 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	EGF	P01133	1207 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	HLA-E	P13747	358 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	ATF2	P15336	505 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	GJA1	P17302	382 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	SOX11	P35716	441 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	ABL2	P42684	1182 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	IL12RB1	P42701	662 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	GNAQ	P50148	359 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	RHD	Q02161	417 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	TUSC3	Q13454	348 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	BYSL	Q13895	437 aa	Known RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	PREPL	Q4J6C6	727 aa	Predicted RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	SPDYC	Q5MJ68	293 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	TMCO4	Q5TGY1	634 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	DENND4C	Q5VZ89	1909 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	FSTL4	Q6MZW2	842 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	NOTUM	Q6P988	496 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	ANKS3	Q6ZW76	656 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	GLRX5	Q86SX6	157 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	SLCO6A1	Q86UG4	719 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	TTC30A	Q86WT1	665 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	KSR1	Q8IVT5	923 aa		6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	ARID3B	Q8IVW6	561 aa	Predicted RBP	6.63	□□□□□ -1.35
KPNB1-209	ENST00000580158	BPIFB1	Q8TDL5	484 aa		6.63	□□□□□ -1.35

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