RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 ATAD1Q8NBU5 361 aa17.52■□□□□ 0.4
RARA-209ENST00000579727 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.4
RARA-209ENST00000579727 MRPL45Q9BRJ2 306 aaKnown RBP17.52■□□□□ 0.4
RARA-209ENST00000579727 PI4K2AQ9BTU6 479 aa17.52■□□□□ 0.4
RARA-209ENST00000579727 MKNK1Q9BUB5 465 aa17.52■□□□□ 0.4
RARA-209ENST00000579727 OXCT2Q9BYC2 517 aaPredicted RBP17.52■□□□□ 0.4
RARA-209ENST00000579727 TMLHEQ9NVH6 421 aa17.52■□□□□ 0.4
RARA-209ENST00000579727 YIPF1Q9Y548 306 aa17.52■□□□□ 0.4
RARA-209ENST00000579727 C19orf67A6NJJ6 358 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 C2CD4DB7Z1M9 353 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 LOC730098B7Z3J9 87 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 LRRN2O75325 713 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 HLA-DRAP01903 254 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 HNRNPA1P09651 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
RARA-209ENST00000579727 PSMC1P62191 440 aaKnown RBP17.51■□□□□ 0.39
RARA-209ENST00000579727 MYL7Q01449 175 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 GET4Q7L5D6 327 aaPredicted RBP17.51■□□□□ 0.39
RARA-209ENST00000579727 TCEAL8Q8IYN2 117 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 TMEM86AQ8N2M4 240 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 TAS1R2Q8TE23 839 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 SMYD3Q9H7B4 428 aa17.51■□□□□ 0.39
RARA-209ENST00000579727 ABI2Q9NYB9 513 aaPredicted RBP17.51■□□□□ 0.39
RARA-209ENST00000579727 USP34Q70CQ2 3546 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 BICDL2A1A5D9 508 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 IKBKBO14920 756 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 ATP2C2O75185 946 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 XYLBO75191 536 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 PDGFRBP09619 1106 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 LMO2P25791 158 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 HOXA9P31269 272 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 ATICP31939 592 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 TSPY1Q01534 308 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 UVSSAQ2YD98 709 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 CCDC40Q4G0X9 1142 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 ZNF667Q5HYK9 610 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 LIMS2Q7Z4I7 341 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 TDRD5Q8NAT2 981 aaKnown RBP17.5■□□□□ 0.39
RARA-209ENST00000579727 PHOX2BQ99453 314 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 SEPT5Q99719 369 aaPredicted RBP17.5■□□□□ 0.39
RARA-209ENST00000579727 LPIN3Q9BQK8 851 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 WDR6Q9NNW5 1121 aaKnown RBP17.5■□□□□ 0.39
RARA-209ENST00000579727 DNMT3BQ9UBC3 853 aaKnown RBP17.5■□□□□ 0.39
RARA-209ENST00000579727 NME7Q9Y5B8 376 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 NOTCH4Q99466 2003 aa17.5■□□□□ 0.39
RARA-209ENST00000579727 GABRDO14764 452 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 N4BP1O75113 896 aaKnown RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 STAU1O95793 577 aaKnown RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 ALADP13716 330 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 WARSP23381 471 aaKnown RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 GBP2P32456 591 aaPredicted RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 MXI1P50539 228 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 CDH8P55286 799 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 DPCR1Q3MIW9 517 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 MGAT5BQ3V5L5 792 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 INTS6LQ5JSJ4 861 aaKnown RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 DPH6Q7L8W6 267 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 DCP1BQ8IZD4 617 aaKnown RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 ST13P5Q8NFI4 369 aaPredicted RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 OR6B3Q8NGW1 331 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 SYT15Q9BQS2 421 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 ACBD6Q9BR61 282 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 CORO1BQ9BR76 489 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 RHOBTB2Q9BYZ6 727 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 SDCBP2Q9H190 292 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 SNX25Q9H3E2 840 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 DPEP3Q9H4B8 488 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 TMEM8AQ9HCN3 771 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 CEP72Q9P209 647 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 ARMCX3Q9UH62 379 aaPredicted RBP17.49■□□□□ 0.39
RARA-209ENST00000579727 GTF3C4Q9UKN8 822 aa17.49■□□□□ 0.39
RARA-209ENST00000579727 TECTAO75443 2155 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 MYBPHLA2RUH7 354 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 PAPLNO95428 1278 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 FSHRP23945 695 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 LHX1P48742 406 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 CBWD6Q4V339 395 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 PABPC1LQ4VXU2 614 aaKnown RBP17.48■□□□□ 0.39
RARA-209ENST00000579727 CBWD3Q5JTY5 395 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 CBWD5Q5RIA9 395 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 KRT39Q6A163 491 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 RNF135Q8IUD6 432 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 HS6ST3Q8IZP7 471 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 STKLD1Q8NE28 680 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 ITFG1Q8TB96 612 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 ING5Q8WYH8 240 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 SEMA4DQ92854 862 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 MED15Q96RN5 788 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 MYADMQ96S97 322 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 SRRTQ9BXP5 876 aaKnown RBP17.48■□□□□ 0.39
RARA-209ENST00000579727 APOBEC3GQ9HC16 384 aaKnown RBP17.48■□□□□ 0.39
RARA-209ENST00000579727 NR2E1Q9Y466 385 aa17.48■□□□□ 0.39
RARA-209ENST00000579727 A8MXQ7 604 aa17.47■□□□□ 0.39
RARA-209ENST00000579727 ASS1P00966 412 aaKnown RBP17.47■□□□□ 0.39
RARA-209ENST00000579727 RHOP08100 348 aa17.47■□□□□ 0.39
RARA-209ENST00000579727 PCSK1P29120 753 aa17.47■□□□□ 0.39
RARA-209ENST00000579727 GPR15P49685 360 aa17.47■□□□□ 0.39
RARA-209ENST00000579727 NLRP12P59046 1061 aa17.47■□□□□ 0.39
RARA-209ENST00000579727 ORC1Q13415 861 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms