RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 PDGFRBP09619 1106 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 LMO2P25791 158 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 TKTP29401 623 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 RABGGTBP53611 331 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 CDR2Q01850 454 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 MLLT1Q03111 559 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 BMS1Q14692 1282 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 RAB30Q15771 203 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 CNGA2Q16280 664 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 SGO2Q562F6 1265 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 ZNF280DQ6N043 979 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 TRIM72Q6ZMU5 477 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 ZNF571Q7Z3V5 609 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 ACOT1Q86TX2 421 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 NOP9Q86U38 636 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 TMEM139Q8IV31 216 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 B3GALNT2Q8NCR0 500 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 BCL7CQ8WUZ0 217 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 ZNF606Q8WXB4 792 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 DDX1Q92499 740 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 TWNKQ96RR1 684 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 CHP1Q99653 195 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 AGPAT1Q99943 283 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 SYT11Q9BT88 431 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 HMGXB4Q9UGU5 601 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 MSRAQ9UJ68 235 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 NOCTQ9UK39 431 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 LZTS1Q9Y250 596 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 CEP83Q9Y592 693 aa11.21□□□□□ -0.61
CDK5RAP3-214ENST00000579632 LTBP2Q14767 1821 aa11.21□□□□□ -0.62
CDK5RAP3-214ENST00000579632 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 GRXCR1A8MXD5 290 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 THAP12O43422 761 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 AKR1B10O60218 316 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 IPO7O95373 1038 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CA3P07451 260 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CD19P15391 556 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 PTPN1P18031 435 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 TNFAIP3P21580 790 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CTNNB1P35222 781 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 EIF4A3P38919 411 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CCZ1BP86790 482 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CCZ1P86791 482 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 TSPY1Q01534 308 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 DSG1Q02413 1049 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CREMQ03060 361 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 UBE3AQ05086 875 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 SLC18A3Q16572 532 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 ASTE1Q2TB18 679 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 CTXN3Q4LDR2 81 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 ARHGAP17Q68EM7 881 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 PPP1R2P3Q6NXS1 205 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 OSTM1Q86WC4 334 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 DCP1BQ8IZD4 617 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 KLHL23Q8NBE8 558 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 TGS1Q96RS0 853 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 RTP3Q9BQQ7 232 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 SYT15Q9BQS2 421 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 C11orf84Q9BUA3 381 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.2□□□□□ -0.621e-6■□□□□ 8
CDK5RAP3-214ENST00000579632 HERC2P3Q9BVR0 1158 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 ZNF518BQ9C0D4 1074 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 LHX5Q9H2C1 402 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 PCDHGC3Q9UN70 934 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 BACE2Q9Y5Z0 518 aa11.2□□□□□ -0.62
CDK5RAP3-214ENST00000579632 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 SOWAHDA6NJG2 315 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 O00370 1275 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 TBC1D4O60343 1298 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 LSM8O95777 96 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 URODP06132 367 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 MMEP08473 750 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 PLEKP08567 350 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 GLUD2P49448 558 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 KIF11P52732 1056 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 ERVK-21P61565 698 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 ORC1Q13415 861 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 SPA17Q15506 151 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 INTS6LQ5JSJ4 861 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 RTP2Q5QGT7 225 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 C10orf76Q5T2E6 689 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 FAM171BQ6P995 826 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 LCLAT1Q6UWP7 414 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 TAS1R1Q7RTX1 841 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 GLYCTKQ8IVS8 523 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 VPS52Q8N1B4 723 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 C12orf29Q8N999 325 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 OR10T2Q8NGX3 314 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 SLC30A5Q8TAD4 765 aa11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 LNX1Q8TBB1 728 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-214ENST00000579632 MYCBPAPQ8TBZ2 947 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms