RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 MTMR12Q9C0I1 747 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 COPEO14579 308 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 LZTS3O60299 673 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 USP2O75604 605 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 FGBP02675 491 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.7
MSI2-209ENST00000579483 FRMD8Q9BZ67 464 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 ATXN3LQ9H3M9 355 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 IGFLR1Q9H665 355 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 GPRC5CQ9NQ84 441 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 DDX43Q9NXZ2 648 aaKnown RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 EPS15L1Q9UBC2 864 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 LSM8O95777 96 aaKnown RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 KRT14P02533 472 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 MAP2K2P36507 400 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 GIT2Q14161 759 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 GJC2Q5T442 439 aaPredicted RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 MOB2Q70IA6 237 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 TRIM59Q8IWR1 403 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 ATL2Q8NHH9 583 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 SMARCD1Q96GM5 515 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 MCEEQ96PE7 176 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.69□□□□□ -0.7
MSI2-209ENST00000579483 SLC12A8A0AV02 714 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 RENBPP51606 427 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 SLC12A1Q13621 1099 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 DHX34Q14147 1143 aaKnown RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 SLC45A4Q5BKX6 768 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 NAPEPLDQ6IQ20 393 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 OTOP1Q7RTM1 612 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 TBC1D1Q86TI0 1168 aaPredicted RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 ZDHHC17Q8IUH5 632 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 MYRIPQ8NFW9 859 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 KRT82Q9NSB4 513 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 UTP6Q9NYH9 597 aaKnown RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 SLIT2O94813 1529 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 M0QYT0 321 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 SUN1O94901 812 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 EPHB2P29323 1055 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 CXCR5P32302 372 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 COPS2P61201 443 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 ITGA7Q13683 1181 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 NOMO2Q5JPE7 1267 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 NOL9Q5SY16 702 aaKnown RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 DHX40Q8IX18 779 aaKnown RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 UBA3Q8TBC4 463 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 GIPC2Q8TF65 315 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 EXT2Q93063 718 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 CHAMP1Q96JM3 812 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 AP1M1Q9BXS5 423 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 FRMD8P1Q9BZ68 369 aaPredicted RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 DMAP1Q9NPF5 467 aaPredicted RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 GSTA4O15217 222 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 ALDH1A2O94788 518 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 SELPP16109 830 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 YWHAQP27348 245 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 GPS1Q13098 491 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 AARS2Q5JTZ9 985 aaKnown RBP10.69□□□□□ -0.7
MSI2-209ENST00000579483 EMBQ6PCB8 327 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 MIB1Q86YT6 1006 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 PPTC7Q8NI37 304 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 FEZF2Q8TBJ5 459 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 CPA5Q8WXQ8 436 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 C1QTNF7Q9BXJ2 289 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 PAK5Q9P286 719 aa10.69□□□□□ -0.7
MSI2-209ENST00000579483 A0A1W2PQJ5 194 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 FZD9O00144 591 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 SEPT4O43236 478 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 RPL9P32969 192 aaKnown RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 CYP24A1Q07973 514 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 TTLL9Q3SXZ7 439 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 LBX2Q6XYB7 198 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ACOT1Q86TX2 421 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 LRRC43Q8N309 656 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ARHGEF26Q96DR7 871 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 KIF2CQ99661 725 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 OXCT2Q9BYC2 517 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 AKAP7Q9P0M2 348 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 INTUQ9ULD6 942 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 CNTNAP2Q9UHC6 1331 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 AHDC1Q5TGY3 1603 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 CHD2O14647 1828 aaKnown RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 MAPK13O15264 365 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 CAND2O75155 1236 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 HSPA4LO95757 839 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 RHOCP08134 193 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ATXN8OSP0DMR3 200 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ZNF135P52742 658 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 SMARCB1Q12824 385 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 USP41Q3LFD5 358 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 SUDS3Q9H7L9 328 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 ZCCHC17Q9NP64 241 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms