RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 EPHB3P54753 998 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 HNRNPDQ14103 355 aaKnown RBP12.13□□□□□ -0.47
GGA3-206ENST00000578773 PTPAQ15257 358 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 GAB4Q2WGN9 574 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 GLRX5Q86SX6 157 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 LSM14AQ8ND56 463 aaKnown RBP12.13□□□□□ -0.47
GGA3-206ENST00000578773 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 HMGB4Q8WW32 186 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 PSMG2Q969U7 264 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 SUSD3Q96L08 255 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 UROC1Q96N76 676 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 ECT2Q9H8V3 914 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 TPCN1Q9ULQ1 816 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 SCN1AP35498 2009 aa12.13□□□□□ -0.47
GGA3-206ENST00000578773 SPTAN1Q13813 2472 aaKnown RBP12.12□□□□□ -0.47
GGA3-206ENST00000578773 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 WEE1P30291 646 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 OPRD1P41143 372 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 OSTNP61366 133 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 LY6DQ14210 128 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 ARHGAP15Q53QZ3 475 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 COLEC12Q5KU26 742 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
GGA3-206ENST00000578773 NCAPH2Q6IBW4 605 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 BAHD1Q8TBE0 780 aaPredicted RBP12.12□□□□□ -0.47
GGA3-206ENST00000578773 KIFC3Q9BVG8 833 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 SLKQ9H2G2 1235 aaPredicted RBP12.12□□□□□ -0.47
GGA3-206ENST00000578773 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
GGA3-206ENST00000578773 BTBD3Q9Y2F9 522 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
GGA3-206ENST00000578773 CAPN9O14815 690 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 USO1O60763 962 aaKnown RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 KLF8O95600 359 aaPredicted RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 MCM4P33991 863 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 NUCB1Q02818 461 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 RPL6Q02878 288 aaKnown RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 GRIK2Q13002 908 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 PRPF4BQ13523 1007 aaKnown RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 CCDC157Q569K6 752 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 TXNDC5Q8NBS9 432 aaKnown RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 GIPC2Q8TF65 315 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 SETD7Q8WTS6 366 aaKnown RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 SPACA7Q96KW9 195 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 ARID3AQ99856 593 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 POLD4Q9HCU8 107 aa12.11□□□□□ -0.47
GGA3-206ENST00000578773 DDX25Q9UHL0 483 aaKnown RBP12.11□□□□□ -0.47
GGA3-206ENST00000578773 ADAM23O75077 832 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 LARGE1O95461 756 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 IGHDP01880 384 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 MAOBP27338 520 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 GNA11P29992 359 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 TIE1P35590 1138 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 ALDH1A3P47895 512 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 SEMG2Q02383 582 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 ZNF33AQ06730 810 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 EML3Q32P44 896 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 PLEKHG6Q3KR16 790 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 ALKAL1Q6UXT8 129 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 GPR155Q7Z3F1 870 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 IL17RCQ8NAC3 791 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 CEP76Q8TAP6 659 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 WHAMMQ8TF30 809 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 HAS1Q92839 578 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 ACAP3Q96P50 834 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 KIAA1522Q9P206 1035 aaPredicted RBP12.1□□□□□ -0.47
GGA3-206ENST00000578773 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
GGA3-206ENST00000578773 TUBGCP4Q9UGJ1 667 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
GGA3-206ENST00000578773 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 NUB1Q9Y5A7 615 aa12.1□□□□□ -0.47
GGA3-206ENST00000578773 TCRBV21S2A2A0A5A6 115 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 SLC28A2O43868 658 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 SLITRK3O94933 977 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 HOXD12P35452 270 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 CXADRP78310 365 aa12.09□□□□□ -0.47
GGA3-206ENST00000578773 BNC1Q01954 994 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms