RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 WEE2P0C1S8 567 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 NDUFV1P49821 464 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ZNF75DP51815 510 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 POLR2FP61218 127 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 INCA1Q0VD86 236 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SMARCB1Q12824 385 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PLPP4Q5VZY2 271 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 WSCD1Q658N2 575 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PHLDB3Q6NSJ2 640 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PPFIBP1Q86W92 1011 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 VSTM4Q8IW00 320 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ARHGEF19Q8IW93 802 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ADAMTS19Q8TE59 1207 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SIX2Q9NPC8 291 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 LMCD1Q9NZU5 365 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 MTRRQ9UBK8 725 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 DPP7Q9UHL4 492 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 IRAK3Q9Y616 596 aa12.03□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GABRDO14764 452 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 LRRN2O75325 713 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CILPO75339 1184 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KRT5P13647 590 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CPB1P15086 417 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 STAT1P42224 750 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RAP1GAPP47736 663 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CDH8P55286 799 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 BPIFB4P59827 614 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MRPL58Q14197 206 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PTPN14Q15678 1187 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NFE2Q16621 373 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KIAA0319Q5VV43 1072 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 IQCEQ6IPM2 695 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TMEM270Q6UE05 265 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 LNX1Q8TBB1 728 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GDPD5Q8WTR4 605 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 C2orf15Q8WU43 125 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KBTBD7Q8WVZ9 684 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MRPL38Q96DV4 380 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SYT15Q9BQS2 421 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MRPL45Q9BRJ2 306 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 VN1R3Q9BXE9 311 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 C1QTNF1Q9BXJ1 281 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 STK33Q9BYT3 514 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KIAA1257Q9ULG3 409 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MYO6Q9UM54 1294 aa12.02□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TRANK1O15050 2925 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MYO7AQ13402 2215 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 FSCN2O14926 492 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 AP5Z1O43299 807 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ADCY5O95622 1261 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 C1RP00736 705 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PAEPP09466 180 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SRGAP2BP0DMP2 458 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PBX1P40424 430 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 USP8P40818 1118 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KLK7P49862 253 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NDST1P52848 882 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ERVFC1P60507 584 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 STILQ15468 1287 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SCARA3Q6AZY7 606 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 DPY19L2P1Q6NXN4 242 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TAS1R1Q7RTX1 841 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MRPL43Q8N983 215 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SHC3Q92529 594 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ELMO3Q96BJ8 720 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TMEM176AQ96HP8 235 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 B3GALT6Q96L58 329 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GANQ9H2C0 597 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NLRC4Q9NPP4 1024 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RAPGEFL1Q9UHV5 662 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MAFFQ9ULX9 164 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CDY1Q9Y6F8 540 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PATJQ8NI35 1801 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MYO16Q9Y6X6 1858 aa12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MED7O43513 233 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PDGFRBP09619 1106 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 FERP16591 822 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 IGFBP6P24592 240 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KLRC2P26717 231 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CDC25BP30305 580 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ELF1P32519 619 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ARPP19P56211 112 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms