RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 RNF103-CHMP3A0A140T963 221 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 GOLGA8CPA6NN73 597 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 DCDC2CA8MYV0 355 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 MEIS2O14770 477 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 P4HA2O15460 535 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 ETS1P14921 441 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 LAYNQ6UX15 382 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 PRPF39Q86UA1 669 aaKnown RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 IFNEQ86WN2 208 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 ANGPTL3Q9Y5C1 460 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 IL1R1P14778 569 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 KCNA3P22001 575 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 MFSD7Q6UXD7 560 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 LPAR1Q92633 364 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 C2orf40Q9H1Z8 148 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 GANQ9H2C0 597 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 CPSF3Q9UKF6 684 aaKnown RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 RASSF10A6NK89 507 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 ICAM1P05362 532 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 CDH8P55286 799 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 GEMIN4P57678 1058 aaKnown RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 TTLL4Q14679 1199 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 PKN2Q16513 984 aaKnown RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 ACAD11Q709F0 780 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 IRF2BP2Q7Z5L9 587 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 FUKQ8N0W3 1084 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 SLC25A41Q8N5S1 370 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 BEST2Q8NFU1 509 aa12.6□□□□□ -0.39
ERBB2-206ENST00000578373 SYTL5Q8TDW5 730 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 ALKBH8Q96BT7 664 aaKnown RBP12.6□□□□□ -0.39
ERBB2-206ENST00000578373 DFFAO00273 331 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PROSCO94903 275 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 MYL3P08590 195 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PECAM1P16284 738 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ESRRGP62508 458 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PRAMEP78395 509 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 YWHAHQ04917 246 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 NPY5RQ15761 445 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 Q4G0T1 1027 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 LRRC6Q86X45 466 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 LRRN4Q8WUT4 740 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 E2F7Q96AV8 911 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 CCDC138Q96M89 665 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 DNPEPQ9ULA0 475 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PGK2P07205 417 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 SNRPAP09012 282 aaKnown RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 SERPINB4P48594 390 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ANKRD20A4Q4UJ75 823 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ARSHQ5FYA8 562 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 FSCBQ5H9T9 825 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 EFHC2Q5JST6 749 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 EFCAB12Q6NXP0 572 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 METTL23Q86XA0 190 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 CDKL3Q8IVW4 592 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ICA1LQ8NDH6 482 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PDCD2LQ9BRP1 358 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 CENPKQ9BS16 269 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 XAB2Q9HCS7 855 aaKnown RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 KLK14Q9P0G3 267 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ARMCX1Q9P291 453 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 TMX2Q9Y320 296 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 MYL2P10916 166 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 CYP24A1Q07973 514 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 MOXD1Q6UVY6 613 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PARD3BQ8TEW8 1205 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PAFAH2Q99487 392 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 BAG5Q9UL15 447 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 STAP1Q9ULZ2 295 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 PIN4Q9Y237 131 aaKnown RBP12.59□□□□□ -0.39
ERBB2-206ENST00000578373 ASTN1O14525 1302 aa12.59□□□□□ -0.39
ERBB2-206ENST00000578373 A0A0A6YYK5 440 aaPredicted RBP12.58□□□□□ -0.39
ERBB2-206ENST00000578373 NPTXRO95502 500 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 APOEP02649 317 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 BGNP21810 368 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 BIRC2Q13490 618 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 QPCTQ16769 361 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 APTXQ7Z2E3 356 aaKnown RBP12.58□□□□□ -0.39
ERBB2-206ENST00000578373 PPIL6Q8IXY8 311 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 ABI1Q8IZP0 508 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms