RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 FOXN3O00409 490 aaPredicted RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 LPXNO60711 386 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 FZD7O75084 574 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 VPS4BO75351 444 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ZFPL1O95159 310 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 MAP4K4O95819 1239 aaPredicted RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 CYP2C9P11712 490 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 XRCC6P12956 609 aaKnown RBP eCLIP2.75□□□□□ -1.976e-6■□□□□ 9.2
PTP4A1-204ENST00000578299 C6P13671 934 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ITGALP20701 1170 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 VIPR2P41587 438 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 NPTX2P47972 431 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 GCLCP48506 637 aaPredicted RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC11A2P49281 568 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 SUMO3P55854 103 aaPredicted RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 UCP3P55916 312 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 WNT3P56703 355 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 MC2RQ01718 297 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 FMO1Q01740 532 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TAP1Q03518 808 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC13A2Q13183 592 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 CTBP1Q13363 440 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 RAB32Q13637 225 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 IQCB1Q15051 598 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 LONRF3Q496Y0 759 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 PREPLQ4J6C6 727 aaPredicted RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 LAYNQ6UX15 382 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC30A10Q6XR72 485 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 USP51Q70EK9 711 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 NOL8Q76FK4 1167 aaKnown RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TMPRSS9Q7Z410 1059 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 C11orf96Q7Z7L8 435 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 GGNQ86UU5 652 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ADGRG5Q8IZF4 528 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 DNAJC5GQ8N7S2 189 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 PJA1Q8NG27 643 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ASB10Q8WXI3 467 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 SNX19Q92543 992 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TMEM125Q96AQ2 219 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TRIM43Q96BQ3 446 aaPredicted RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 LRIG1Q96JA1 1093 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 MLST8Q9BVC4 326 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ZNF518BQ9C0D4 1074 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 SERHL2Q9H4I8 314 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ZNF287Q9HBT7 754 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ARNT2Q9HBZ2 717 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TBCCD1Q9NVR7 557 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 MRPS18AQ9NVS2 196 aaKnown RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 XPR1Q9UBH6 696 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 CPNE7Q9UBL6 633 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TESQ9UGI8 421 aaKnown RBP2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 FAM50BQ9Y247 325 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 PCDHGB6Q9Y5F9 930 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 A0A0B4J269 797 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 TRIAP1O43715 76 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 PQBP1O60828 265 aaKnown RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 NBPF7P0C2Y1 421 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 ATXN1LP0C7T5 689 aaKnown RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 EGR2P11161 476 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 ITGAMP11215 1152 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 CHRM3P20309 590 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 ZEB1P37275 1124 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 NDUFV1P49821 464 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 TOB1P50616 345 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 LOXL3P58215 753 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 ZXDAP98168 799 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SATB1Q01826 763 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SCAPQ12770 1279 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 TUBB3Q13509 450 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 CD300EQ496F6 205 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 IGFL4Q6B9Z1 124 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SFRP4Q6FHJ7 346 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 GPR149Q86SP6 731 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 ULK2Q8IYT8 1036 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 LCORLQ8N3X6 602 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 LNX2Q8N448 690 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC15A4Q8N697 577 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 FBXO41Q8TF61 875 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 PHKBQ93100 1093 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 NMD3Q96D46 503 aaKnown RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 PTCD3Q96EY7 689 aaKnown RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 MSLNLQ96KJ4 702 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC46A1Q96NT5 459 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 OSBPL9Q96SU4 736 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 WDR11Q9BZH6 1224 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 TTYH3Q9C0H2 523 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SMOC2Q9H3U7 446 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SMURF2Q9HAU4 748 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 A1CFQ9NQ94 594 aaKnown RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SACM1LQ9NTJ5 587 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 STK32BQ9NY57 414 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 RGS17Q9UGC6 210 aaPredicted RBP2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 SHOC2Q9UQ13 582 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 DMTF1Q9Y222 760 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 HS3ST3A1Q9Y663 406 aa2.74□□□□□ -1.97
PTP4A1-204ENST00000578299 MBD3L4A6NDZ8 208 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MBD3L3A6NE82 208 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 TMEM191CA6NGB0 347 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 RHPN2P1A8MT19 583 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms