RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 PAXIP1Q6ZW49 1069 aaPredicted RBP18.56■□□□□ 0.56
ERBB2-205ENST00000578199 SPATS2Q86XZ4 545 aaKnown RBP18.56■□□□□ 0.56
ERBB2-205ENST00000578199 LRRC34Q8IZ02 419 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 RCOR2Q8IZ40 523 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 JOSD2Q8TAC2 188 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 ARHGEF2Q92974 986 aaKnown RBP18.56■□□□□ 0.56
ERBB2-205ENST00000578199 CENPTQ96BT3 561 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 SDCBP2Q9H190 292 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 HOMER3Q9NSC5 361 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 HMGXB4Q9UGU5 601 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 DNAJC25-GNG10A0A024R161 153 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 LRRD1A4D1F6 860 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 ATP2C2O75185 946 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 SLC25A27O95847 323 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 MBTD1Q05BQ5 628 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 PPP1R15BQ5SWA1 713 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 SPOCD1Q6ZMY3 1216 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 EMC1Q8N766 993 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 CCDC89Q8N998 374 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 ANKRD36BP1Q96IX9 119 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 CPB2Q96IY4 423 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 OSBPL7Q9BZF2 842 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 ZWILCHQ9H900 591 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 EFCC1Q9HA90 598 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 SIX4Q9UIU6 781 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 C5orf60A6NFR6 353 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 DYNLT1P63172 113 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 MOGSQ13724 837 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 CNGA2Q16280 664 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 GKAP1Q5VSY0 366 aaPredicted RBP18.55■□□□□ 0.56
ERBB2-205ENST00000578199 CYP4F22Q6NT55 531 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 ANKRD13AQ8IZ07 590 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 CACNA2D3Q8IZS8 1091 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 OPTNQ96CV9 577 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 TWNKQ96RR1 684 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 ROPN1BQ9BZX4 212 aaPredicted RBP18.55■□□□□ 0.56
ERBB2-205ENST00000578199 C2orf40Q9H1Z8 148 aa18.55■□□□□ 0.56
ERBB2-205ENST00000578199 ROPN1Q9HAT0 212 aaPredicted RBP18.55■□□□□ 0.56
ERBB2-205ENST00000578199 LSM8O95777 96 aaKnown RBP18.54■□□□□ 0.56
ERBB2-205ENST00000578199 CYP2C8P10632 490 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 FAM182AQ5T1J6 154 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 MFSD5Q6N075 450 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 DPH6Q7L8W6 267 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 KIAA0319LQ8IZA0 1049 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 C1orf127Q8N9H9 656 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 IFT122Q9HBG6 1241 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 ANK1P16157 1881 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 A0A087WZ62 844 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 LACTBL1A8MY62 500 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 ITGB3P05106 788 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 EIF4BP23588 611 aaKnown RBP18.54■□□□□ 0.56
ERBB2-205ENST00000578199 PLCB3Q01970 1234 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 ARFGAP1Q8N6T3 406 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 RBM41Q96IZ5 413 aaKnown RBP18.54■□□□□ 0.56
ERBB2-205ENST00000578199 FDXACB1Q9BRP7 624 aaPredicted RBP18.54■□□□□ 0.56
ERBB2-205ENST00000578199 TMEM121Q9BTD3 319 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 SMARCAD1Q9H4L7 1026 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 SMYD3Q9H7B4 428 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 RPF1Q9H9Y2 349 aaKnown RBP18.54■□□□□ 0.56
ERBB2-205ENST00000578199 KCNK9Q9NPC2 374 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 RNF181Q9P0P0 153 aa18.54■□□□□ 0.56
ERBB2-205ENST00000578199 SPDYE5A6NIY4 337 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 B4GALT4O60513 344 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 TJP3O95049 919 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 VIMP08670 466 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 ARSEP51690 589 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 JADE1Q6IE81 842 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 HIBCHQ6NVY1 386 aaPredicted RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CAPN12Q6ZSI9 719 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 YTHDF3Q7Z739 585 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 ANKRD42Q8N9B4 389 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CDCA5Q96FF9 252 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 SERPINB12Q96P63 405 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 RBM15Q96T37 977 aaKnown RBP eCLIP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 MPHOSPH6Q99547 160 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 PCDHGC3Q9UN70 934 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 ATXN2Q99700 1313 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 TMEM120BA0PK00 339 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 PIK3R2O00459 728 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CXCL11O14625 94 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 GAS2O43903 313 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CPP00450 1065 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 VTNP04004 478 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 INSRRP14616 1297 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 PSMA2P25787 234 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 IL1R2P27930 398 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CETN2P41208 172 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CAV1Q03135 178 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 TFDP1Q14186 410 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 FASTKD3Q14CZ7 662 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 SURF1Q15526 300 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 KCNV1Q6PIU1 500 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 TAOK1Q7L7X3 1001 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 TAX1BP1Q86VP1 789 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 TAB3Q8N5C8 712 aaPredicted RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 C3orf20Q8ND61 904 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 CPXM1Q96SM3 734 aa18.53■□□□□ 0.56
ERBB2-205ENST00000578199 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.53■□□□□ 0.56
ERBB2-205ENST00000578199 hCG_1818297A0A087WSY0 165 aa18.52■□□□□ 0.56
ERBB2-205ENST00000578199 DNM1LO00429 736 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms