RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 MARCH5Q9NX47 278 aa18.04■□□□□ 0.48
CDK5RAP3-207ENST00000578134 DDX43Q9NXZ2 648 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-207ENST00000578134 SPG21Q9NZD8 308 aa18.04■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ADAMTS1Q9UHI8 967 aa18.04■□□□□ 0.48
CDK5RAP3-207ENST00000578134 H7C4K7 107 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ZSCAN12O43309 604 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ITGB1P05556 798 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 PLEKP08567 350 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 CD19P15391 556 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 FGFR3P22607 806 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 IGFBP6P24592 240 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 MAPRE1Q15691 268 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ARHGAP17Q68EM7 881 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 SLC39A11Q8N1S5 342 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 COLGALT1Q8NBJ5 622 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 HASPINQ8TF76 798 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 TMEM169Q96HH4 297 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 LHX5Q9H2C1 402 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 KCND1Q9NSA2 647 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 PUF60Q9UHX1 559 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 CEP83Q9Y592 693 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 MRPL42Q9Y6G3 142 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
CDK5RAP3-207ENST00000578134 LSM8O95777 96 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 EFEMP2O95967 443 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 CCDC175P0C221 793 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 CHRNB2P17787 502 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 PTPN1P18031 435 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 RGS19P49795 217 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 FMO1Q01740 532 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 KRT17Q04695 432 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 MRPL58Q14197 206 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 USP41Q3LFD5 358 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 FAM171A1Q5VUB5 890 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ALKBH5Q6P6C2 394 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ANKS3Q6ZW76 656 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 TMCO2Q7Z6W1 182 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 TWNKQ96RR1 684 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 GDF15Q99988 308 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 NAGPAQ9UK23 515 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ADGRG1Q9Y653 693 aa18.02■□□□□ 0.48
CDK5RAP3-207ENST00000578134 ATP8B3O60423 1300 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 A0A087X0T9 212 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 OR6C75A6NL08 312 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 DDX3XO00571 662 aaKnown RBP eCLIP18.01■□□□□ 0.471e-8■■■□□ 15.4
CDK5RAP3-207ENST00000578134 RTN2O75298 545 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 PDGFRBP09619 1106 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 FAM228BP0C875 321 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 LMO2P25791 158 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 BMP8BP34820 402 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 TSPY1Q01534 308 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SMARCB1Q12824 385 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 LCLAT1Q6UWP7 414 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 DDX53Q86TM3 631 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 ACOT1Q86TX2 421 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 ZSCAN30Q86W11 494 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 OSTM1Q86WC4 334 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 GLYCTKQ8IVS8 523 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 B3GALNT2Q8NCR0 500 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 TTPALQ9BTX7 342 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 PLVAPQ9BX97 442 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 GPR62Q9BZJ7 368 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 UBE2OQ9C0C9 1292 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SSX2IPQ9Y2D8 614 aa18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 TIMM13Q9Y5L4 95 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-207ENST00000578134 MKI67P46013 3256 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 GOLGA6L9A6NEM1 432 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 NT5C1B-RDH14C9J2C7 533 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 I3L4J1 428 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 CYP1A1P04798 512 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 MMEP08473 750 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 CDH5P33151 784 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 MAGEA1P43355 309 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 PLCB3Q01970 1234 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 GFPT1Q06210 699 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SHHQ15465 462 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 CCDC122Q5T0U0 273 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 TAF3Q5VWG9 929 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 ZNF662Q6ZS27 426 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 RNF168Q8IYW5 571 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 DCP1BQ8IZD4 617 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 TMEM35BQ8NCS4 154 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 LNX1Q8TBB1 728 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 KIAA1524Q8TCG1 905 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SLC20A1Q8WUM9 679 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 CYFIP2Q96F07 1278 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SYT15Q9BQS2 421 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 ISCUQ9H1K1 167 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 ACP6Q9NPH0 428 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 CHST7Q9NS84 486 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 SEPT11Q9NVA2 429 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 HESX1Q9UBX0 185 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 HMGXB4Q9UGU5 601 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 NENFQ9UMX5 172 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 WDR3Q9UNX4 943 aaKnown RBP eCLIP18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 PCDHA13Q9Y5I0 950 aa18■□□□□ 0.47
CDK5RAP3-207ENST00000578134 PCDHA11Q9Y5I1 949 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms