RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 FGF13Q92913 245 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 ELMO3Q96BJ8 720 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 GCNAQ96QF7 691 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 SYT15Q9BQS2 421 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 RHOBTB2Q9BYZ6 727 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 GTPBP4Q9BZE4 634 aaKnown RBP9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 SMOC2Q9H3U7 446 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 KCNK12Q9HB15 430 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 DMAC2Q9NW81 257 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 GDAP2Q9NXN4 497 aa9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 MAGED2Q9UNF1 606 aaPredicted RBP9.9□□□□□ -0.82
CDKN2A-211ENST00000577854 VWA8A3KMH1 1905 aa9.9□□□□□ -0.83
CDKN2A-211ENST00000577854 TMEM221A6NGB7 291 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 A8MXQ7 604 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 GOLGA6L22H0YM25 854 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 M0R296 226 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 HCRTO43612 131 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 AKAP3O75969 853 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 GJA1P17302 382 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 ATICP31939 592 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 GCLMP48507 274 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 SIGLEC14Q08ET2 396 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 TDGQ13569 410 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 NFE2Q16621 373 aaPredicted RBP9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 TRIM67Q6ZTA4 783 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 MTSS1LQ765P7 747 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 CREBRFQ8IUR6 639 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 SUGP1Q8IWZ8 645 aaKnown RBP9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 NPAS3Q8IXF0 933 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 TTC16Q8NEE8 873 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 PLEKHO2Q8TD55 490 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 GPR152Q8TDT2 470 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 C2orf15Q8WU43 125 aaKnown RBP9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 TCEAL4Q96EI5 215 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 BORCS6Q96GS4 357 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 GBP4Q96PP9 640 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 LPIN3Q9BQK8 851 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 RTP3Q9BQQ7 232 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 ACBD6Q9BR61 282 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 LRFN3Q9BTN0 628 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 ATXN3LQ9H3M9 355 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 CEP72Q9P209 647 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 IGSF9Q9P2J2 1179 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 MAN1B1Q9UKM7 699 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 GTF3C4Q9UKN8 822 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 NUMBLQ9Y6R0 609 aa9.89□□□□□ -0.83
CDKN2A-211ENST00000577854 TCHHQ07283 1943 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 PDCD11Q14690 1871 aaKnown RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 A0A1W2PRU2 124 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 TRIM49BA6NDI0 452 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 STX10O60499 249 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 ATP2C2O75185 946 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 HLA-DRAP01903 254 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 CFHP08603 1231 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 POU2F2P09086 479 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 TRIM21P19474 475 aaKnown RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 WARSP23381 471 aaKnown RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 ANXA13P27216 316 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 GNL1P36915 607 aaPredicted RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 PPP1R2P41236 205 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 RAP1GAPP47736 663 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 STX17P56962 302 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 FKBP3Q00688 224 aaKnown RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 CCDC142Q17RM4 750 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 SLC5A9Q2M3M2 681 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 EDRF1Q3B7T1 1238 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 CCDC40Q4G0X9 1142 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 ARHGAP15Q53QZ3 475 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 MDH1BQ5I0G3 518 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 SDHAF4Q5VUM1 108 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 ANKRD40Q6AI12 368 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 PARM1Q6UWI2 310 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 C4orf50Q6ZRC1 276 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 HFE2Q6ZVN8 426 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 DPH6Q7L8W6 267 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 LRRTM3Q86VH5 581 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 LEMD2Q8NC56 503 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 STKLD1Q8NE28 680 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 CXorf38Q8TB03 319 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 NELFBQ8WX92 580 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 IPO9Q96P70 1041 aaKnown RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 KXD1Q9BQD3 176 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 MRPL45Q9BRJ2 306 aaKnown RBP9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 MED10Q9BTT4 135 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 SMYD3Q9H7B4 428 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 TMLHEQ9NVH6 421 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 EPS15L1Q9UBC2 864 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 CDH9Q9ULB4 789 aa9.88□□□□□ -0.83
CDKN2A-211ENST00000577854 HCN4Q9Y3Q4 1203 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms