RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 CHD8Q9HCK8 2581 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 TPRP12270 2363 aaKnown RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 PTPRJQ12913 1337 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 TBCAO75347 108 aaKnown RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 PPP1R37O75864 691 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 KRT37O76014 449 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 CYP11A1P05108 521 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 HMGA1P17096 107 aaKnown RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 TXNDC8Q6A555 127 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 FSTL4Q6MZW2 842 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 LEMD2Q8NC56 503 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 TTC16Q8NEE8 873 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 CXorf38Q8TB03 319 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 LARP4BQ92615 738 aaKnown RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 SLC22A12Q96S37 553 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 FAM213AQ9BRX8 229 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 STRA6Q9BX79 667 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 PANK2Q9BZ23 570 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 EBF3Q9H4W6 596 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 AGO2Q9UKV8 859 aaKnown RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 MAFFQ9ULX9 164 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 STYXL1Q9Y6J8 313 aa13□□□□□ -0.33
PRPF8-215ENST00000576958 KMT2BQ9UMN6 2715 aaPredicted RBP13□□□□□ -0.33
PRPF8-215ENST00000576958 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 CCR3P51677 355 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 CCINQ13939 588 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 SIM2Q14190 667 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 DDR2Q16832 855 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 ARMCX5Q6P1M9 558 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 ZNF720Q7Z2F6 126 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 SPEM1Q8N4L4 309 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 C1orf127Q8N9H9 656 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 BPIFB1Q8TDL5 484 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 USP13Q92995 863 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 DNAJC19Q96DA6 116 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 AK8Q96MA6 479 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 TASP1Q9H6P5 420 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 GKN1Q9NS71 199 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
PRPF8-215ENST00000576958 MAGED2Q9UNF1 606 aaPredicted RBP12.99□□□□□ -0.33
PRPF8-215ENST00000576958 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
PRPF8-215ENST00000576958 ACACBO00763 2458 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 MYO16Q9Y6X6 1858 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 H0YCG3 227 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 DPYSL4O14531 572 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 EGFP01133 1207 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 F11P03951 625 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 ITGB3P05106 788 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 CYP2F1P24903 491 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 DDIT3P35638 169 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
PRPF8-215ENST00000576958 TAF6P49848 677 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 NLRP12P59046 1061 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 TFAMQ00059 246 aaKnown RBP12.98□□□□□ -0.33
PRPF8-215ENST00000576958 SF3A2Q15428 464 aaKnown RBP12.98□□□□□ -0.33
PRPF8-215ENST00000576958 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 FAM160A2Q8N612 972 aaPredicted RBP12.98□□□□□ -0.33
PRPF8-215ENST00000576958 POMGNT1Q8WZA1 660 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 CYP2S1Q96SQ9 504 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 PKMYT1Q99640 499 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 GMEB2Q9UKD1 530 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
PRPF8-215ENST00000576958 AGAP1Q9UPQ3 857 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 RALGAPA1Q6GYQ0 2036 aa12.98□□□□□ -0.33
PRPF8-215ENST00000576958 MAP1BP46821 2468 aaKnown RBP12.97□□□□□ -0.33
PRPF8-215ENST00000576958 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 SCAMP3O14828 347 aaKnown RBP12.97□□□□□ -0.33
PRPF8-215ENST00000576958 XPOTO43592 962 aaKnown RBP12.97□□□□□ -0.33
PRPF8-215ENST00000576958 ATP2C2O75185 946 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 RESTQ13127 1097 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 LAIR1Q6GTX8 287 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 CMTM8Q8IZV2 173 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 FAM83CQ9BQN1 747 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 GPR88Q9GZN0 384 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 SEMA4GQ9NTN9 838 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 GTF3C4Q9UKN8 822 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 DERAQ9Y315 318 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 C2CD2Q9Y426 696 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 ASB3Q9Y575 518 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 NME7Q9Y5B8 376 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 FRYQ5TBA9 3013 aa12.97□□□□□ -0.33
PRPF8-215ENST00000576958 CACNA1BQ00975 2339 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 DCLK1O15075 740 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms