RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CMTM8Q8IZV2 173 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 MAB21L3Q8N8X9 362 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 TMEM161BQ8NDZ6 487 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 RPLP0P6Q8NHW5 317 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 RIN3Q8TB24 985 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 EZH1Q92800 747 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 USP13Q92995 863 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 DRC1Q96MC2 740 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 SCNM1Q9BWG6 230 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 NUP210Q8TEM1 1887 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-220ENST00000576940 ZFYVE26Q68DK2 2539 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 LNP1A1A4G5 178 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 ANTXRLA6NF34 631 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 SRRM3A6NNA2 597 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 PATE3B3GLJ2 98 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 CDX4O14627 284 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 F11P03951 625 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 CLTAP09496 248 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 MAPTP10636 758 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 CDC25CP30307 473 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 GBP1P32455 592 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 GJA4P35212 333 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 AVPR1AP37288 418 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 PSMD2Q13200 908 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 ELF2Q15723 593 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 IL17AQ16552 155 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 DAB2IPQ5VWQ8 1189 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 TXNDC8Q6A555 127 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 FAM212AQ96EL1 285 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 P2RY13Q9BPV8 354 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 C17orf75Q9HAS0 396 aa10.97□□□□□ -0.65
NPLOC4-220ENST00000576940 IGF2RP11717 2491 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 KHNYNO15037 678 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 PLS3P13797 630 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 DRD1P21728 446 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 DGKEP52429 567 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 IRX4P78413 519 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 AMPD2Q01433 879 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 PPP2R3AQ06190 1150 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 BFSP1Q12934 665 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 ORC2Q13416 577 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 DMC1Q14565 340 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 VEPH1Q14D04 833 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 ENOX2Q16206 610 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 UAP1L1Q3KQV9 507 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 SPATA1Q5VX52 437 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 KRT79Q5XKE5 535 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 ZPBP2Q6X784 338 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 SYT13Q7L8C5 426 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 IGSF22Q8N9C0 903 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 STKLD1Q8NE28 680 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 GCNAQ96QF7 691 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 PLIN2Q99541 437 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 ZCWPW1Q9H0M4 648 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 TDP1Q9NUW8 608 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 HSFX1Q9UBD0 423 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 EBF1Q9UH73 591 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 TBX20Q9UMR3 447 aa10.96□□□□□ -0.65
NPLOC4-220ENST00000576940 AKAP13Q12802 2813 aa10.96□□□□□ -0.66
NPLOC4-220ENST00000576940 NPHP3-ACAD11A0A0J9YXS1 232 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 PIRO00625 290 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 APBB3O95704 486 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 HAPLN1P10915 354 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 ODC1P11926 461 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 CEACAM1P13688 526 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 HMGA1P17096 107 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 GPR15P49685 360 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 SMTNP53814 917 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 NLRP12P59046 1061 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 RING1Q06587 406 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 ACAP1Q15027 740 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 SDHAF4Q5VUM1 108 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 JADE1Q6IE81 842 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 KIAA1211LQ6NV74 962 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 LRSAM1Q6UWE0 723 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 DEFB124Q8NES8 71 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 GATA6Q92908 595 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 BICD1Q96G01 975 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 C8orf76Q96K31 380 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 CYP2S1Q96SQ9 504 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 MMTAG2Q9BU76 263 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 TPSD1Q9BZJ3 242 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 FOXP1Q9H334 677 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 ECT2Q9H8V3 914 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 RPF1Q9H9Y2 349 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 TMEM9BQ9NQ34 198 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 MAGED2Q9UNF1 606 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
NPLOC4-220ENST00000576940 FASNP49327 2511 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 ANK1P16157 1881 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 CYB561D2O14569 222 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 XPOTO43592 962 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms