RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CCT6AP40227 531 aaKnown RBP17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 TUFMP49411 452 aaKnown RBP17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 DMP1Q13316 513 aaPredicted RBP17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 SLC39A12Q504Y0 691 aa17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 C11orf74Q86VG3 221 aa17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 TTC30AQ86WT1 665 aa17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 DIS3L2Q8IYB7 885 aaKnown RBP17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 ACDQ96AP0 544 aa17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 TDP1Q9NUW8 608 aa17.68■□□□□ 0.42
CTDNEP1-211ENST00000575783 PFKFB2O60825 505 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 CXCL8P10145 99 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 FDPSP14324 419 aaKnown RBP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 ATF6P18850 670 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 NMT1P30419 496 aaKnown RBP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 LRPAP1P30533 357 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 MATR3P43243 847 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 GUCY2FP51841 1108 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 LMAN2Q12907 356 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 SOWAHCQ53LP3 525 aaPredicted RBP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 TRIM61Q5EBN2 209 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 ANO7Q6IWH7 933 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 EZH1Q92800 747 aaPredicted RBP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 ARHGAP28Q9P2N2 729 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 TBX20Q9UMR3 447 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 KIAA1024Q9UPX6 916 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 TRIP11Q15643 1979 aa17.67■□□□□ 0.42
CTDNEP1-211ENST00000575783 SLC16A4O15374 487 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 HIP1RO75146 1068 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 ZIC2O95409 532 aaPredicted RBP17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 SEC24BO95487 1268 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 TYMPP19971 482 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 NOLC1Q14978 699 aaKnown RBP eCLIP17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 PDGFRLQ15198 375 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 TXNDC8Q6A555 127 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 CHCHD4Q8N4Q1 142 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 CPA6Q8N4T0 437 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 RIN3Q8TB24 985 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 CD101Q93033 1021 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 NUSAP1Q9BXS6 441 aaKnown RBP17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 ECT2Q9H8V3 914 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 HSFX1Q9UBD0 423 aa17.66■□□□□ 0.42
CTDNEP1-211ENST00000575783 SFI1A8K8P3 1242 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 PPEF2O14830 753 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 TOM1L1O75674 476 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 OR52Z1P0C646 297 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 RDXP35241 583 aaKnown RBP17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 STRN3Q13033 797 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 ZNF174Q15697 407 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 HAUS3Q68CZ6 603 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 ARMCX6Q7L4S7 300 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 PROSER1Q86XN7 944 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 DAW1Q8N136 415 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 OR10T2Q8NGX3 314 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 SENP8Q96LD8 212 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 DDX19AQ9NUU7 478 aaKnown RBP17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 ZMYM5Q9UJ78 669 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 UBQLN1Q9UMX0 589 aaKnown RBP17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 ATG2BQ96BY7 2078 aa17.65■□□□□ 0.42
CTDNEP1-211ENST00000575783 CLDN3O15551 220 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 MAP3K13O43283 966 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 ODC1P11926 461 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 ENGP17813 658 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 CYP3A5P20815 502 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 MUTP22033 750 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 SEC13P55735 322 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 NLRP12P59046 1061 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 LILRA4P59901 499 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 TRIM29Q14134 588 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 ZBTB6Q15916 424 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 C2orf27AQ580R0 203 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 TMEM150AQ86TG1 271 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 PDZD3Q86UT5 571 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 KIF9Q9HAQ2 790 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 DUS2Q9NX74 493 aaKnown RBP17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 EVLQ9UI08 416 aaPredicted RBP17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 GPSM3Q9Y4H4 160 aa17.64■□□□□ 0.41
CTDNEP1-211ENST00000575783 FLNBO75369 2602 aaKnown RBP17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 TTC26A0AVF1 554 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 LACTBL1A8MY62 500 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 F11P03951 625 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 CLTAP09496 248 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 LPCAT2Q7L5N7 544 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 TMEFF1Q8IYR6 380 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 CCDC33Q8N5R6 958 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 RLN3Q8WXF3 142 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 MRPS31Q92665 395 aaKnown RBP17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 DRC1Q96MC2 740 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 ZCWPW1Q9H0M4 648 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 TMEM74BQ9NUR3 256 aa17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 MAGED2Q9UNF1 606 aaPredicted RBP17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 KIF26AQ9ULI4 1882 aaPredicted RBP17.63■□□□□ 0.41
CTDNEP1-211ENST00000575783 EML5Q05BV3 1969 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 IGSF10Q6WRI0 2623 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms